RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PRPF6O94906 941 aaKnown RBP28.53■■■□□ 2.16
CHFR-218ENST00000540963 GAD2Q05329 585 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 MESP2Q0VG99 397 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 DUOXA1Q1HG43 343 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 MDH1BQ5I0G3 518 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 SLC36A4Q6YBV0 504 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 C12orf40Q86WS4 652 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 SFTPA1Q8IWL2 248 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 PHTF2Q8N3S3 785 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 HMGB4Q8WW32 186 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 FGFBP2Q9BYJ0 223 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 SNX25Q9H3E2 840 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 CIZ1Q9ULV3 898 aaPredicted RBP28.53■■■□□ 2.16
CHFR-218ENST00000540963 MORC2Q9Y6X9 1032 aaPredicted RBP28.53■■■□□ 2.16
CHFR-218ENST00000540963 WDFY3Q8IZQ1 3526 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 H0Y626 953 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 TRIM16O95361 564 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 ABL1P00519 1130 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 MBL2P11226 248 aaPredicted RBP28.52■■■□□ 2.16
CHFR-218ENST00000540963 MAPK8P45983 427 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 EMC10Q5UCC4 262 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 NUDT18Q6ZVK8 323 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 HS2ST1Q7LGA3 356 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 TRAPPC11Q7Z392 1133 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 CCDC65Q8IXS2 484 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 ZCCHC14Q8WYQ9 949 aaKnown RBP28.52■■■□□ 2.16
CHFR-218ENST00000540963 SLC6A14Q9UN76 642 aa28.52■■■□□ 2.16
CHFR-218ENST00000540963 PKD1L2Q7Z442 2459 aa28.51■■■□□ 2.16
CHFR-218ENST00000540963 CACNA1EQ15878 2313 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 TCRBV21S2A2A0A5A6 115 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 HOXC11O43248 304 aaPredicted RBP28.51■■■□□ 2.15
CHFR-218ENST00000540963 RTN3O95197 1032 aaPredicted RBP28.51■■■□□ 2.15
CHFR-218ENST00000540963 RDXP35241 583 aaKnown RBP28.51■■■□□ 2.15
CHFR-218ENST00000540963 STAT6P42226 847 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 ARMCX6Q7L4S7 300 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 CBWD2Q8IUF1 395 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 ETFBKMTQ8IXQ9 262 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 FRMD1Q8N878 549 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 ZFYVE26Q68DK2 2539 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 DMXL2Q8TDJ6 3036 aa28.51■■■□□ 2.15
CHFR-218ENST00000540963 SERPINF2P08697 491 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 PTPN1P18031 435 aaKnown RBP28.5■■■□□ 2.15
CHFR-218ENST00000540963 ATXN3P54252 364 aaPredicted RBP28.5■■■□□ 2.15
CHFR-218ENST00000540963 HNRNPDQ14103 355 aaKnown RBP28.5■■■□□ 2.15
CHFR-218ENST00000540963 LY6G5CQ5SRR4 150 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 SNX30Q5VWJ9 437 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 BTBD8Q5XKL5 378 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 NUP93Q8N1F7 819 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 PGBD3Q8N328 593 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 HDDC3Q8N4P3 179 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 OR6B3Q8NGW1 331 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 MRPL45Q9BRJ2 306 aaKnown RBP28.5■■■□□ 2.15
CHFR-218ENST00000540963 HSPBP1Q9NZL4 362 aa28.5■■■□□ 2.15
CHFR-218ENST00000540963 ADAMTS9Q9P2N4 1935 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 FAM221BA6H8Z2 402 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 HYAL3O43820 417 aaPredicted RBP28.49■■■□□ 2.15
CHFR-218ENST00000540963 STAU1O95793 577 aaKnown RBP28.49■■■□□ 2.15
CHFR-218ENST00000540963 ITPKAP23677 461 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 YWHAQP27348 245 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 TUBP50607 506 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 KDSRQ06136 332 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 GFPT1Q06210 699 aaPredicted RBP28.49■■■□□ 2.15
CHFR-218ENST00000540963 COL9A2Q14055 689 aaPredicted RBP28.49■■■□□ 2.15
CHFR-218ENST00000540963 CLIC6Q96NY7 704 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 CAPN10Q9HC96 672 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 DEC1Q9P2X7 70 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 NME7Q9Y5B8 376 aa28.49■■■□□ 2.15
CHFR-218ENST00000540963 PCDH15Q96QU1 1955 aa28.48■■■□□ 2.15
CHFR-218ENST00000540963 TBC1D3BA6NDS4 549 aa28.48■■■□□ 2.15
CHFR-218ENST00000540963 CFIP05156 583 aa28.48■■■□□ 2.15
CHFR-218ENST00000540963 PDCP20941 246 aa28.48■■■□□ 2.15
CHFR-218ENST00000540963 SIM1P81133 766 aaPredicted RBP28.48■■■□□ 2.15
CHFR-218ENST00000540963 ZNF513Q8N8E2 541 aaPredicted RBP28.48■■■□□ 2.15
CHFR-218ENST00000540963 ZFRQ96KR1 1074 aaKnown RBP28.48■■■□□ 2.15
CHFR-218ENST00000540963 TMEM30AQ9NV96 361 aa28.48■■■□□ 2.15
CHFR-218ENST00000540963 STARD13Q9Y3M8 1113 aa28.48■■■□□ 2.15
CHFR-218ENST00000540963 COCHO43405 550 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 CST3P01034 146 aaPredicted RBP28.47■■■□□ 2.15
CHFR-218ENST00000540963 CACNA2D1P54289 1103 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 TNNC1P63316 161 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 RPL6Q02878 288 aaKnown RBP28.47■■■□□ 2.15
CHFR-218ENST00000540963 KIAA1211LQ6NV74 962 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 B3GALNT2Q8NCR0 500 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 ZNF518BQ9C0D4 1074 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 LRRC27Q9C0I9 530 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 SH3BP1Q9Y3L3 701 aa28.47■■■□□ 2.15
CHFR-218ENST00000540963 VPS37CA5D8V6 355 aaPredicted RBP28.46■■■□□ 2.15
CHFR-218ENST00000540963 SCAMP3O14828 347 aaKnown RBP28.46■■■□□ 2.15
CHFR-218ENST00000540963 EIF3DO15371 548 aaKnown RBP eCLIP28.46■■■□□ 2.15
CHFR-218ENST00000540963 OPHN1O60890 802 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 ZNF217O75362 1048 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 TULP3O75386 442 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 SNRNP35Q16560 246 aaKnown RBP28.46■■■□□ 2.15
CHFR-218ENST00000540963 WDR72Q3MJ13 1102 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 HECTD3Q5T447 861 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 TERB1Q8NA31 727 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 FBXO32Q969P5 355 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 B3GNT5Q9BYG0 378 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 COMMD8Q9NX08 183 aa28.46■■■□□ 2.15
CHFR-218ENST00000540963 IL37Q9NZH6 218 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms