RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 VPS16Q9H269 839 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 TBC1D17Q9HA65 648 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 KIF9Q9HAQ2 790 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 GKN1Q9NS71 199 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 COMMD8Q9NX08 183 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 SMPD4Q9NXE4 827 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 SCML2Q9UQR0 700 aa9.74□□□□□ -0.85
SNHG1-215ENST00000540904 SYCE3A1L190 88 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 FAM92AA1XBS5 289 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 TULP2O00295 520 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ARNTLO00327 626 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 XPO1O14980 1071 aaKnown RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 COCHO43405 550 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PI15O43692 258 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 LETM1O95202 739 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 OAS1P00973 400 aaKnown RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PFKLP17858 780 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PTMSP20962 102 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CDK11BP21127 795 aaKnown RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CD72P21854 359 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 AVPR2P30518 371 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CLCN5P51795 746 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 KPNA1P52294 538 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 KIF11P52732 1056 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ZNF132P52740 706 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 STARD6P59095 220 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PLCB2Q00722 1185 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PRKCQQ04759 706 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 TNK2Q07912 1038 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PDE4CQ08493 712 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ZNF268Q14587 947 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 MTF1Q14872 753 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 HECTD3Q5T447 861 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CC2D1AQ6P1N0 951 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 LCLAT1Q6UWP7 414 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PIGZQ86VD9 579 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ANKRD20A12PQ8NF67 263 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CSGALNACT1Q8TDX6 532 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 FAM81BQ96LP2 452 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ZSWIM1Q9BR11 485 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 NACA2Q9H009 215 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CCSER2Q9H7U1 834 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 SIX2Q9NPC8 291 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 TRPV5Q9NQA5 729 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 TLR8Q9NR97 1041 aaKnown RBP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 GTSE1Q9NYZ3 720 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 RAPGEFL1Q9UHV5 662 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 ARHGAP26Q9UNA1 814 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CNTN6Q9UQ52 1028 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 HCN4Q9Y3Q4 1203 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 CPQQ9Y646 472 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 PIAS3Q9Y6X2 628 aa9.73□□□□□ -0.85
SNHG1-215ENST00000540904 TRIOO75962 3097 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 A0A1W2PQH9 124 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 KANSL1LA0AUZ9 987 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 M0QYV0 167 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 LEFTY2O00292 366 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 TLR5O60602 858 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 OLFM2O95897 454 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 TBX18O95935 607 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 DCNP07585 359 aaKnown RBP9.72□□□□□ -0.85
SNHG1-215ENST00000540904 ZDHHC11BP0C7U3 371 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 SETSIPP0DME0 302 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-215ENST00000540904 AOC1P19801 751 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 SOX9P48436 509 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 TKTL1P51854 596 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 SLC7A9P82251 487 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 ZXDBP98169 803 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 USP4Q13107 963 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 UBXN2BQ14CS0 331 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 NCAPHQ15003 741 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 STILQ15468 1287 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 ZNF77Q15935 545 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 CNGA2Q16280 664 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 FKBP15Q5T1M5 1219 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 SNX30Q5VWJ9 437 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 TRIM68Q6AZZ1 485 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 ZNF852Q6ZMS4 543 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 CCDC186Q7Z3E2 898 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 TMEM105Q8N8V8 129 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 PJA1Q8NG27 643 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 SECISBP2LQ93073 1101 aaKnown RBP9.72□□□□□ -0.85
SNHG1-215ENST00000540904 LSM14BQ9BX40 385 aaKnown RBP9.72□□□□□ -0.85
SNHG1-215ENST00000540904 UBXN6Q9BZV1 441 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 EBF3Q9H4W6 596 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 LRRC4Q9HBW1 653 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 ACP6Q9NPH0 428 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 OSER1Q9NX31 292 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 DUS2Q9NX74 493 aaKnown RBP9.72□□□□□ -0.85
SNHG1-215ENST00000540904 NAGPAQ9UK23 515 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 DNAJC12Q9UKB3 198 aa9.72□□□□□ -0.85
SNHG1-215ENST00000540904 AJAP1Q9UKB5 411 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms