RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SECISBP2LQ93073 1101 aaKnown RBP17.64■□□□□ 0.41
UBC-208ENST00000540700 C8orf48Q96LL4 319 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 MYADMQ96S97 322 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 LRRC3Q9BY71 257 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 PRKD2Q9BZL6 878 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 ZNF334Q9HCZ1 680 aaPredicted RBP17.64■□□□□ 0.41
UBC-208ENST00000540700 ZDHHC7Q9NXF8 308 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 AIPL1Q9NZN9 384 aa17.64■□□□□ 0.41
UBC-208ENST00000540700 DENND4AQ7Z401 1863 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 M0QYV0 167 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 SRFP11831 508 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 SKILP12757 684 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 HMGA1P17096 107 aaKnown RBP17.63■□□□□ 0.41
UBC-208ENST00000540700 HOXA9P31269 272 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 ADKP55263 362 aaKnown RBP17.63■□□□□ 0.41
UBC-208ENST00000540700 ZBED6P86452 979 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 FMO1Q01740 532 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 PTK2Q05397 1052 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 ARID5BQ14865 1188 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 HGSNATQ68CP4 663 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 POTEHQ6S545 545 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 TMC8Q8IU68 726 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 PASD1Q8IV76 773 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 CNTNAP3BQ96NU0 1288 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 PCDHB18PQ96TA0 734 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 CNTNAP3Q9BZ76 1288 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 WDR6Q9NNW5 1121 aaKnown RBP17.63■□□□□ 0.41
UBC-208ENST00000540700 DMAP1Q9NPF5 467 aaPredicted RBP17.63■□□□□ 0.41
UBC-208ENST00000540700 DNMT3BQ9UBC3 853 aaKnown RBP17.63■□□□□ 0.41
UBC-208ENST00000540700 PCDHGC3Q9UN70 934 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 SIT1Q9Y3P8 196 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.63■□□□□ 0.412e-15■■□□□ 12.6
UBC-208ENST00000540700 CLUHO75153 1309 aa17.63■□□□□ 0.41
UBC-208ENST00000540700 SLC38A8A6NNN8 435 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 MFAP3LO75121 409 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 LRG1P02750 347 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 POU2F2P09086 479 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 HNRNPA1P09651 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
UBC-208ENST00000540700 KRT9P35527 623 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 CCR2P41597 374 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 GPD2P43304 727 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 BCAT1P54687 386 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 ASIC2Q16515 512 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 RSPO4Q2I0M5 234 aaPredicted RBP17.62■□□□□ 0.41
UBC-208ENST00000540700 SFMBT2Q5VUG0 894 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 WDR59Q6PJI9 974 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 RTL10Q7L3V2 364 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 PIGZQ86VD9 579 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 C1orf210Q8IVY1 113 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 SCAMP5Q8TAC9 235 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 SLC35F5Q8WV83 523 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 SMG7Q92540 1137 aaKnown RBP17.62■□□□□ 0.41
UBC-208ENST00000540700 SPATA17Q96L03 361 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 EPS15L1Q9UBC2 864 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 TJP2Q9UDY2 1190 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 PATJQ8NI35 1801 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 CACNA1GO43497 2377 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 ATP8B3O60423 1300 aa17.62■□□□□ 0.41
UBC-208ENST00000540700 TRIM66O15016 1216 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 MOSPD3O75425 235 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 TADA3O75528 432 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 PLEKP08567 350 aaPredicted RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 FERP16591 822 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 CDC25BP30305 580 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 PRKCIP41743 596 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 ALDH1A3P47895 512 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 PGFP49763 221 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 PDE6CP51160 858 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 SLC5A3P53794 718 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 BPIFB4P59827 614 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 RPL10AP62906 217 aaKnown RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 BST2Q10589 180 aaKnown RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 TRIM14Q14142 442 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 ZNF571Q7Z3V5 609 aaPredicted RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 GRASPQ7Z6J2 395 aaPredicted RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 DNAJB7Q7Z6W7 309 aaPredicted RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 TC2NQ8N9U0 490 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 C1orf131Q8NDD1 294 aaKnown RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 PSMG2Q969U7 264 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 DNAJC7Q99615 494 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 FOXQ1Q9C009 403 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 HAUS4Q9H6D7 363 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 PIDD1Q9HB75 910 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 IL21Q9HBE4 155 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 DLL3Q9NYJ7 618 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 DPP7Q9UHL4 492 aa17.61■□□□□ 0.41
UBC-208ENST00000540700 LUC7L2Q9Y383 392 aaKnown RBP17.61■□□□□ 0.41
UBC-208ENST00000540700 C2orf16Q68DN1 1984 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 PIK3R2O00459 728 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 XPO1O14980 1071 aaKnown RBP17.6■□□□□ 0.41
UBC-208ENST00000540700 HNRNPH3P31942 346 aaKnown RBP17.6■□□□□ 0.41
UBC-208ENST00000540700 PLA2G4AP47712 749 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 RGS7P49802 495 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 EPHB3P54753 998 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 CDR2Q01850 454 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 PLD1Q13393 1074 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 STILQ15468 1287 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 SLC5A9Q2M3M2 681 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms