RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 SLC23A3Q6PIS1 610 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 SLC36A4Q6YBV0 504 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 RABEPKQ7Z6M1 372 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 HDDC3Q8N4P3 179 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 FBXO32Q969P5 355 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 SCNM1Q9BWG6 230 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 NACA2Q9H009 215 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 CUEDC2Q9H467 287 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 DEC1Q9P2X7 70 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 NUP205Q92621 2012 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 ABCA7Q8IZY2 2146 aa13.27□□□□□ -0.29
COPS7A-211ENST00000540408 ZFHX4Q86UP3 3567 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 PHACTR2O75167 634 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 CFIP05156 583 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ENGP17813 658 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 SPINK2P20155 84 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ATICP31939 592 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 PTGER3P43115 390 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 KIR2DL1P43626 348 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 SNRPFP62306 86 aaKnown RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 PSMD6Q15008 389 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 DUOXA1Q1HG43 343 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ANO4Q32M45 955 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 FAM173BQ6P4H8 233 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 NAT16Q8N8M0 369 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 B3GALNT2Q8NCR0 500 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF507Q8TCN5 953 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 TNIP3Q96KP6 325 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 MED10Q9BTT4 135 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF518BQ9C0D4 1074 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 ZSCAN16Q9H4T2 348 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 CHORDC1Q9UHD1 332 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 SLC6A14Q9UN76 642 aa13.26□□□□□ -0.29
COPS7A-211ENST00000540408 MORC2Q9Y6X9 1032 aaPredicted RBP13.26□□□□□ -0.29
COPS7A-211ENST00000540408 HELZP42694 1942 aaKnown RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 USP24Q9UPU5 2620 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 ANTXRLA6NF34 631 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 COCHO43405 550 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 STAU1O95793 577 aaKnown RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 HNRNPLP14866 589 aaKnown RBP eCLIP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 SYT1P21579 422 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 CYP2J2P51589 502 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 ASIC1P78348 528 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 RPL6Q02878 288 aaKnown RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 CUL4AQ13619 759 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 MAP7D1Q3KQU3 841 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 C12orf40Q86WS4 652 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 SFTPA1Q8IWL2 248 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 FRMD1Q8N878 549 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 XXYLT1Q8NBI6 393 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 HPS3Q969F9 1004 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 GTPBP2Q9BX10 602 aaKnown RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 B3GNT5Q9BYG0 378 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 DPEP3Q9H4B8 488 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 SPHK2Q9NRA0 654 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 AGPAT3Q9NRZ7 376 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 COMMD8Q9NX08 183 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 MBD1Q9UIS9 605 aaPredicted RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 PILRBQ9UKJ0 227 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 RALYQ9UKM9 306 aaKnown RBP13.25□□□□□ -0.29
COPS7A-211ENST00000540408 WASF3Q9UPY6 502 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 KIAA1549LQ6ZVL6 1849 aa13.25□□□□□ -0.29
COPS7A-211ENST00000540408 A0A087X0B3 334 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 UPK3BL1B0FP48 263 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 UPK3BL2E5RIL1 263 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 H0Y626 953 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 CLDN5O00501 218 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 CLIC2O15247 247 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 OPHN1O60890 802 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 ADAM23O75077 832 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF217O75362 1048 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 TULP3O75386 442 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 TRIM16O95361 564 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 HOXB2P14652 356 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 TRIM21P19474 475 aaKnown RBP13.24□□□□□ -0.29
COPS7A-211ENST00000540408 ITPKAP23677 461 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 NTSR1P30989 418 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 TUBP50607 506 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 CACNA2D1P54289 1103 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 CYP24A1Q07973 514 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 MESP2Q0VG99 397 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 HNRNPDQ14103 355 aaKnown RBP13.24□□□□□ -0.29
COPS7A-211ENST00000540408 STK38Q15208 465 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 FAM26FQ5R3K3 315 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 C10orf76Q5T2E6 689 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 SNX30Q5VWJ9 437 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 IQUBQ8NA54 791 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 XPO6Q96QU8 1125 aaKnown RBP13.24□□□□□ -0.29
COPS7A-211ENST00000540408 USP28Q96RU2 1077 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms