RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 AGO3Q9H9G7 860 aaKnown RBP7.91□□□□□ -1.14
NECAP1-204ENST00000540083 KANSL3Q9P2N6 904 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 SSX2IPQ9Y2D8 614 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 LUC7L2Q9Y383 392 aaKnown RBP7.91□□□□□ -1.14
NECAP1-204ENST00000540083 HCN4Q9Y3Q4 1203 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 L3MBTL1Q9Y468 752 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 UMODL1Q5DID0 1318 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 CNTNAP2Q9UHC6 1331 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 TANC1Q9C0D5 1861 aa7.91□□□□□ -1.14
NECAP1-204ENST00000540083 DNAH12Q6ZR08 3092 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ALPK3Q96L96 1907 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ZMYM2Q9UBW7 1377 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 A0A0U1RQF3 1178 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 SMIM31A0A1B0GVY4 71 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ENPP3O14638 875 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 HNRNPDLO14979 420 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 CLDN3O15551 220 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 OIP5O43482 229 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TACC1O75410 805 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ZNF189O75820 626 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 RHOBTB3O94955 611 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 OAS1P00973 400 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 RPN1P04843 607 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ATP1A1P05023 1023 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 CLTAP09496 248 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 FAM157BP0CG42 384 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ACRP10323 421 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 PAX3P23760 479 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 PCK1P35558 622 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MATR3P43243 847 aaKnown RBP eCLIP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MSH2P43246 934 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 PDE6CP51160 858 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 SEC24CP53992 1094 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 YARSP54577 528 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 OXCT1P55809 520 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MARSP56192 900 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 BNIP1Q12981 228 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 COASYQ13057 564 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MBTPS1Q14703 1052 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 KRT72Q14CN4 511 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 SKIDA1Q1XH10 827 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ATF7IP2Q5U623 682 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TMEM154Q6P9G4 183 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 CEP128Q6ZU80 1094 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ASRGL1Q7L266 308 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 USP37Q86T82 979 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 SFR1Q86XK3 245 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 CREG2Q8IUH2 290 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 RNF10Q8N5U6 811 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TMEM40Q8WWA1 233 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ATXN2LQ8WWM7 1075 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 INPP5DQ92835 1189 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TOP1MTQ969P6 601 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 ZNF317Q96PQ6 595 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 C2orf49Q9BVC5 232 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 EIF2AQ9BY44 585 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MRPL9Q9BYD2 267 aaKnown RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 CARD9Q9H257 536 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 THAP9Q9H5L6 903 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 KIAA1586Q9HCI6 787 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TOPORSQ9NS56 1045 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TXLNGQ9NUQ3 528 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TMEM161AQ9NX61 479 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 STOML1Q9UBI4 398 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 STK39Q9UEW8 545 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MSRAQ9UJ68 235 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
NECAP1-204ENST00000540083 HCN2Q9UL51 889 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TBX20Q9UMR3 447 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 TNFSF13BQ9Y275 285 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 RWDD3Q9Y3V2 267 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 INSL6Q9Y581 213 aa7.9□□□□□ -1.14
NECAP1-204ENST00000540083 MYH11P35749 1972 aa7.9□□□□□ -1.15
NECAP1-204ENST00000540083 MKI67P46013 3256 aaKnown RBP7.9□□□□□ -1.15
NECAP1-204ENST00000540083 ATP8B3O60423 1300 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 NPHP3-ACAD11A0A0J9YXS1 232 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 KHNYNO15037 678 aaKnown RBP7.89□□□□□ -1.15
NECAP1-204ENST00000540083 XPOTO43592 962 aaKnown RBP7.89□□□□□ -1.15
NECAP1-204ENST00000540083 TSPAN1O60635 241 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 KRT38O76015 456 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 PIGRP01833 764 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 MCF2P10911 925 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 ITGA4P13612 1032 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 ARF4P18085 180 aaPredicted RBP7.89□□□□□ -1.15
NECAP1-204ENST00000540083 RFX1P22670 979 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 PEX5P50542 639 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 WDR5P61964 334 aaKnown RBP7.89□□□□□ -1.15
NECAP1-204ENST00000540083 FAM189BP81408 668 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 SMAD3P84022 425 aaKnown RBP7.89□□□□□ -1.15
NECAP1-204ENST00000540083 PDE1BQ01064 536 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 KCNMA1Q12791 1236 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 DSC3Q14574 896 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 INAQ16352 499 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 FIGNQ5HY92 759 aa7.89□□□□□ -1.15
NECAP1-204ENST00000540083 CCDC122Q5T0U0 273 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms