RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 GTSE1Q9NYZ3 720 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 AJAP1Q9UKB5 411 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 CNTN6Q9UQ52 1028 aa19.32■□□□□ 0.68
SNRPA1-203ENST00000540017 COCHO43405 550 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 BRD2P25440 801 aaKnown RBP19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 SOX9P48436 509 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 TYRO3Q06418 890 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 PDE4CQ08493 712 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 USP4Q13107 963 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 TRIM68Q6AZZ1 485 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 PIGZQ86VD9 579 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 TTC16Q8NEE8 873 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 UBA3Q8TBC4 463 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 SH3RF2Q8TEC5 729 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 SHDQ96IW2 340 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 FAM83CQ9BQN1 747 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 FBXO44Q9H4M3 255 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 CCSER2Q9H7U1 834 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 NMUR1Q9HB89 426 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 OSER1Q9NX31 292 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 TAB2Q9NYJ8 693 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 ARHGAP26Q9UNA1 814 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 SCML2Q9UQR0 700 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 USP3Q9Y6I4 520 aa19.31■□□□□ 0.68
SNRPA1-203ENST00000540017 HELZP42694 1942 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 KANSL1LA0AUZ9 987 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 PFKLP17858 780 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 EEF1GP26641 437 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 SLC7A9P82251 487 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 KCNMA1Q12791 1236 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 PKDCCQ504Y2 493 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 UBXN6Q9BZV1 441 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 HPS4Q9NQG7 708 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 THG1LQ9NWX6 298 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 SMPD4Q9NXE4 827 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 APEX2Q9UBZ4 518 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 KIAA1257Q9ULG3 409 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 PIAS3Q9Y6X2 628 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 MYO16Q9Y6X6 1858 aa19.3■□□□□ 0.68
SNRPA1-203ENST00000540017 OTOL1A6NHN0 477 aaPredicted RBP19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 BECN2A8MW95 431 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 DCNP07585 359 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 KRT5P13647 590 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 GLULP15104 373 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 ARSAP15289 507 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 TCF3P15923 654 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 RFX1P22670 979 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 PDE6CP51160 858 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 BCAT1P54687 386 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 MTF1Q14872 753 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 NCAPHQ15003 741 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 ARHGAP44Q17R89 818 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 RAB41Q5JT25 222 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 HECTD3Q5T447 861 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 SCD5Q86SK9 330 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 ZNF687Q8N1G0 1237 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 PRSS33Q8NF86 280 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 PJA1Q8NG27 643 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 CSGALNACT1Q8TDX6 532 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 ZFRQ96KR1 1074 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 HSD3B7Q9H2F3 369 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 EBF3Q9H4W6 596 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 LTB4R2Q9NPC1 389 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 ACP6Q9NPH0 428 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 DLGAP2Q9P1A6 1054 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 HESX1Q9UBX0 185 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 SIT1Q9Y3P8 196 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 HCN4Q9Y3Q4 1203 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 CPQQ9Y646 472 aa19.29■□□□□ 0.68
SNRPA1-203ENST00000540017 A0A1W2PQH9 124 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 LEFTY2O00292 366 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 XPO1O14980 1071 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 GABBR2O75899 941 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 TBX18O95935 607 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 MBL2P11226 248 aaPredicted RBP19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 TARSP26639 723 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 TUBP50607 506 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 MFAP3P55082 362 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 PLCB2Q00722 1185 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 MYL5Q02045 173 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 BST2Q10589 180 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 UBXN2BQ14CS0 331 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 KRT31Q15323 416 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 CNGA2Q16280 664 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 KLHL40Q2TBA0 621 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 CCDC186Q7Z3E2 898 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 CCDC105Q8IYK2 499 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 VPS16Q9H269 839 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 LINC00597Q9H2U6 94 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 TLR8Q9NR97 1041 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 WNT6Q9Y6F9 365 aa19.28■□□□□ 0.68
SNRPA1-203ENST00000540017 FAM170BA6NMN3 283 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 SCAMP3O14828 347 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 TLR5O60602 858 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 KPNA1P52294 538 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 FZD5Q13467 585 aa19.27■□□□□ 0.68
SNRPA1-203ENST00000540017 ANO6Q4KMQ2 910 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms