RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DHCR24Q15392 516 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 C2orf27AQ580R0 203 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 PPM1JQ5JR12 505 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 TMEM174Q8WUU8 243 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 RNF38Q9H0F5 515 aa16.22■□□□□ 0.19
UBE3B-211ENST00000539843 ZBTB24O43167 697 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 C4BPAP04003 597 aaKnown RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 MPLP40238 635 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 RAP1GAPP47736 663 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 LIMK1P53667 647 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 CDH8P55286 799 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 GAD2Q05329 585 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 ZACNQ401N2 412 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 EOGTQ5NDL2 527 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 NAIF1Q69YI7 327 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 INTS8Q75QN2 995 aaKnown RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 TRMT11Q7Z4G4 463 aaKnown RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 ACOT1Q86TX2 421 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 TTC30AQ86WT1 665 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 ADGRG2Q8IZP9 1017 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 USP33Q8TEY7 942 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 SPACA7Q96KW9 195 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 POLMQ9NP87 494 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 TLR8Q9NR97 1041 aaKnown RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 DMAC2Q9NW81 257 aa16.21■□□□□ 0.19
UBE3B-211ENST00000539843 LSM7Q9UK45 103 aaKnown RBP16.21■□□□□ 0.19
UBE3B-211ENST00000539843 MAPK13O15264 365 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 KLRC4O43908 158 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 FAM200BP0CF97 657 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 OPRD1P41143 372 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 GRIA2P42262 883 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 CACNA2D1P54289 1103 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 CREB5Q02930 508 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 BYSLQ13895 437 aaKnown RBP16.2■□□□□ 0.18
UBE3B-211ENST00000539843 PLK5Q496M5 336 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 ANO7Q6IWH7 933 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 CNOT6LQ96LI5 555 aaKnown RBP16.2■□□□□ 0.18
UBE3B-211ENST00000539843 KCNK16Q96T55 309 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 SCAND2PQ9GZW5 306 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-211ENST00000539843 KCTD10Q9H3F6 313 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 ARHGEF4Q9NR80 690 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 BCCIPQ9P287 314 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBE3B-211ENST00000539843 CHORDC1Q9UHD1 332 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-211ENST00000539843 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-211ENST00000539843 MMP17Q9ULZ9 603 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 NME7Q9Y5B8 376 aa16.2■□□□□ 0.18
UBE3B-211ENST00000539843 COCHO43405 550 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 KAT7O95251 611 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 ADRB1P08588 477 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 NR2F2P24468 414 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 VAMP7P51809 220 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 NDST1P52848 882 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 PKP1Q13835 747 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 SNX30Q5VWJ9 437 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 SV2AQ7L0J3 742 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 TADA2BQ86TJ2 420 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 PLEKHO2Q8TD55 490 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 WHAMMQ8TF30 809 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 GZF1Q9H116 711 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-211ENST00000539843 GMIPQ9P107 970 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 TRAF3IP3Q9Y228 551 aa16.19■□□□□ 0.18
UBE3B-211ENST00000539843 TBC1D3BA6NDS4 549 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 K7EQS6 105 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 GDF9O60383 454 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 TLR5O60602 858 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 VNN1O95497 513 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 CAVIN2O95810 425 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 ASS1P00966 412 aaKnown RBP16.18■□□□□ 0.18
UBE3B-211ENST00000539843 HLA-DRAP01903 254 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 CCDC130P13994 396 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 TNFRSF4P43489 277 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 MAP3K7CLP57077 242 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 ZXDBP98169 803 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 KDSRQ06136 332 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 SF3A2Q15428 464 aaKnown RBP16.18■□□□□ 0.18
UBE3B-211ENST00000539843 CRY1Q16526 586 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 ANO4Q32M45 955 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 RNF43Q68DV7 783 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 FAM186BQ8IYM0 893 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 FUKQ8N0W3 1084 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 TTC39CQ8N584 583 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 CCDC33Q8N5R6 958 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 SCAMP5Q8TAC9 235 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 EZH1Q92800 747 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-211ENST00000539843 NT5C1AQ9BXI3 368 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 TPSD1Q9BZJ3 242 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 DUSP15Q9H1R2 295 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-211ENST00000539843 CYP3A43Q9HB55 503 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.18■□□□□ 0.182e-32■■■■■ 546.5
UBE3B-211ENST00000539843 FAM49BQ9NUQ9 324 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 DEC1Q9P2X7 70 aa16.18■□□□□ 0.18
UBE3B-211ENST00000539843 NCOR2Q9Y618 2525 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 SCAMP3O14828 347 aaKnown RBP16.17■□□□□ 0.18
UBE3B-211ENST00000539843 MAP3K13O43283 966 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 STX10O60499 249 aa16.17■□□□□ 0.18
UBE3B-211ENST00000539843 RHOBTB3O94955 611 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms