RNA–Protein interactions for RNA: ENST00000539396.5

STRN4-204, Transcript of striatin 4, humanhuman

TSL 2 BASIC

Gene STRN4, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-204ENST00000539396 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
STRN4-204ENST00000539396 RIBC1Q8N443 379 aaPredicted RBP18.35■□□□□ 0.53
STRN4-204ENST00000539396 FAM172AQ8WUF8 416 aa18.35■□□□□ 0.53
STRN4-204ENST00000539396 PIN4Q9Y237 131 aaKnown RBP18.35■□□□□ 0.53
STRN4-204ENST00000539396 ARL4CP56559 192 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 ROR1Q01973 937 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 P3H4Q92791 437 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 TREHO43280 583 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 TMEM63AO94886 807 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 SDC4P31431 198 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 NOMO1Q15155 1222 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 ANKS4BQ8N8V4 417 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 PYROXD1Q8WU10 500 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 CKAP2Q8WWK9 683 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 RNF157Q96PX1 679 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 FGFR1OP2Q9NVK5 253 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 NKIRAS1Q9NYS0 192 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 ACTL7BQ9Y614 415 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 CLUHO75153 1309 aa18.34■□□□□ 0.53
STRN4-204ENST00000539396 DPYSL4O14531 572 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 ATP2C2O75185 946 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 IL4RP24394 825 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 BASP1P80723 227 aaKnown RBP18.33■□□□□ 0.53
STRN4-204ENST00000539396 ACTN3Q08043 901 aaPredicted RBP18.33■□□□□ 0.53
STRN4-204ENST00000539396 TFDP2Q14188 446 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 SNX17Q15036 470 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 MORN1Q5T089 497 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 TRABD2AQ86V40 505 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 TDRPQ86YL5 185 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.33■□□□□ 0.53
STRN4-204ENST00000539396 ADAM33Q9BZ11 813 aa18.33■□□□□ 0.53
STRN4-204ENST00000539396 NSRP1Q9H0G5 558 aaKnown RBP18.33■□□□□ 0.53
STRN4-204ENST00000539396 XPO7Q9UIA9 1087 aaKnown RBP18.33■□□□□ 0.53
STRN4-204ENST00000539396 UBQLN1Q9UMX0 589 aaKnown RBP18.33■□□□□ 0.53
STRN4-204ENST00000539396 SMIM28A0A1B0GU29 152 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 H7C0C1 242 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 DNM1LO00429 736 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 SPTLC1O15269 473 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 SPAG7O75391 227 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 SETSIPP0DME0 302 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 FGFR1P11362 822 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 CCDC130P13994 396 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 TFE3P19532 575 aaPredicted RBP18.33■□□□□ 0.52
STRN4-204ENST00000539396 LMO2P25791 158 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 ADORA2BP29275 332 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 SSTR1P30872 391 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 STX2P32856 288 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 RDXP35241 583 aaKnown RBP18.33■□□□□ 0.52
STRN4-204ENST00000539396 ATP5OP48047 213 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 MAP2K5Q13163 448 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 PKN2Q16513 984 aaKnown RBP18.33■□□□□ 0.52
STRN4-204ENST00000539396 CA9Q16790 459 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 BOLA3Q53S33 107 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 UNC93AQ86WB7 457 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 MAP7D3Q8IWC1 876 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 CCT6BQ92526 530 aa18.33■□□□□ 0.52
STRN4-204ENST00000539396 WDR83Q9BRX9 315 aaKnown RBP18.33■□□□□ 0.52
STRN4-204ENST00000539396 ZNF865P0CJ78 1059 aaPredicted RBP18.32■□□□□ 0.52
STRN4-204ENST00000539396 PSEN2P49810 448 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 CCL14Q16627 93 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 BBS9Q3SYG4 887 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 ANKRD20A8PQ5CZ79 823 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 FBXO47Q5MNV8 452 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 ARHGEF18Q6ZSZ5 1173 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 PLD5Q8N7P1 536 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 CLEC4CQ8WTT0 213 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 KBTBD7Q8WVZ9 684 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 KIF9Q9HAQ2 790 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 H0YHG0 523 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 PIRO00625 290 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 PIAS1O75925 651 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 MYL3P08590 195 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 KRT15P19012 456 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 STIP1P31948 543 aaKnown RBP18.32■□□□□ 0.52
STRN4-204ENST00000539396 GNL1P36915 607 aaPredicted RBP18.32■□□□□ 0.52
STRN4-204ENST00000539396 ADAM17P78536 824 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 BEX3Q00994 111 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 SYCP2LQ5T4T6 812 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 FBXW10Q5XX13 1052 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 NUGGCQ68CJ6 796 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 GOLGA2P5Q9HBQ8 144 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 PCDH18Q9HCL0 1135 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 UBN1Q9NPG3 1134 aa18.32■□□□□ 0.52
STRN4-204ENST00000539396 CCT8L1PA6NM43 557 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 NR1H3Q13133 447 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 ITIH4Q14624 930 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 EFTUD2Q15029 972 aaKnown RBP eCLIP18.31■□□□□ 0.529e-7■■■■■ 31.1
STRN4-204ENST00000539396 PDK2Q15119 407 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 PCBP1Q15365 356 aaKnown RBP eCLIP18.31■□□□□ 0.521e-9■■■■■ 43.6
STRN4-204ENST00000539396 ARHGAP17Q68EM7 881 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 C3orf62Q6ZUJ4 267 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 PQLC3Q8N755 202 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 FBXO36Q8NEA4 188 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 SNRNP25Q9BV90 132 aaKnown RBP18.31■□□□□ 0.52
STRN4-204ENST00000539396 TRABDQ9H4I3 376 aa18.31■□□□□ 0.52
STRN4-204ENST00000539396 RABGEF1Q9UJ41 708 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms