RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 DNAJB14Q8TBM8 379 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 FOXP1Q9H334 677 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-209ENST00000539197 SMURF2Q9HAU4 748 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 DRG1Q9Y295 367 aaKnown RBP6.34□□□□□ -1.39
CCDC7-209ENST00000539197 ANKRD6Q9Y2G4 727 aa6.34□□□□□ -1.39
CCDC7-209ENST00000539197 ABLIM3O94929 683 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 OAZ2O95190 189 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 DIO1P49895 249 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 ZNF91Q05481 1191 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 CCNIQ14094 377 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 TMEM63BQ5T3F8 832 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 DENND2CQ68D51 928 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 SPARTQ8N0X7 666 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 KBTBD7Q8WVZ9 684 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 CTHRC1Q96CG8 243 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 WWOXQ9NZC7 414 aa6.33□□□□□ -1.4
CCDC7-209ENST00000539197 M0R3H8 397 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 SPRY2O43597 315 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 UBXN7O94888 489 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
CCDC7-209ENST00000539197 DCAF12L1Q5VU92 463 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 PTCHD4Q6ZW05 846 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 DENND1CQ8IV53 801 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 IGFBPL1Q8WX77 278 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 MAML1Q92585 1016 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
CCDC7-209ENST00000539197 MARK4Q96L34 752 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 LRGUKQ96M69 825 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 SNX15Q9NRS6 342 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 POT1Q9NUX5 634 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 USP22Q9UPT9 525 aa6.32□□□□□ -1.4
CCDC7-209ENST00000539197 ZMYM2Q9UBW7 1377 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 CD8B2A6NJW9 211 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 PRKAR1BP31321 381 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 BCAT1P54687 386 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 ID2Q02363 134 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 SLC13A2Q13183 592 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 LEXMQ3ZCV2 418 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 ANO7Q6IWH7 933 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 KIAA1161Q6NSJ0 714 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 DAAM2Q86T65 1068 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 LIX1LQ8IVB5 337 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 OR6B3Q8NGW1 331 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 ACO2Q99798 780 aaKnown RBP6.31□□□□□ -1.4
CCDC7-209ENST00000539197 RHOBTB2Q9BYZ6 727 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 DPH1Q9BZG8 443 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 ATP6V0A4Q9HBG4 840 aa6.31□□□□□ -1.4
CCDC7-209ENST00000539197 A0A1W2PPL8 197 aa6.3□□□□□ -1.4
CCDC7-209ENST00000539197 ATF7P17544 494 aaPredicted RBP6.3□□□□□ -1.4
CCDC7-209ENST00000539197 LARS2Q15031 903 aaKnown RBP6.3□□□□□ -1.4
CCDC7-209ENST00000539197 TMTC4Q5T4D3 741 aa6.3□□□□□ -1.4
CCDC7-209ENST00000539197 DEF8Q6ZN54 512 aa6.3□□□□□ -1.4
CCDC7-209ENST00000539197 ZNF548Q8NEK5 533 aaPredicted RBP6.3□□□□□ -1.4
CCDC7-209ENST00000539197 OR56A3Q8NH54 315 aa6.3□□□□□ -1.4
CCDC7-209ENST00000539197 MAFAQ8NHW3 353 aaPredicted RBP6.3□□□□□ -1.4
CCDC7-209ENST00000539197 WDYHV1Q96HA8 205 aa6.3□□□□□ -1.4
CCDC7-209ENST00000539197 HEY2Q9UBP5 337 aa6.3□□□□□ -1.4
CCDC7-209ENST00000539197 H3BNX3 289 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 TBC1D4O60343 1298 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 TLR2O60603 784 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 SRGAP2O75044 1071 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 ALPLP05186 524 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC7-209ENST00000539197 B3GNT9Q6UX72 402 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 MEPCEQ7L2J0 689 aaKnown RBP6.29□□□□□ -1.4
CCDC7-209ENST00000539197 TPH2Q8IWU9 490 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 LINC01465Q8N7H1 131 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 MAFFQ9ULX9 164 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 CDY1Q9Y6F8 540 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 SQORQ9Y6N5 450 aa6.29□□□□□ -1.4
CCDC7-209ENST00000539197 H3BML4 177 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 CT47B1P0C2W7 299 aaPredicted RBP6.28□□□□□ -1.4
CCDC7-209ENST00000539197 EPHA3P29320 983 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 UQCRC1P31930 480 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 THBS4P35443 961 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 THBS3P49746 956 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 MTHFSP49914 203 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 ITGA8P53708 1063 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 RAB32Q13637 225 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 RANBP10Q6VN20 620 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 DCDC5Q6ZRR9 648 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 PIM3Q86V86 326 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 ANKRD13BQ86YJ7 626 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 SPATA3Q8NHX4 192 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 HS6ST2Q96MM7 605 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 DNMT3BQ9UBC3 853 aaKnown RBP6.28□□□□□ -1.4
CCDC7-209ENST00000539197 ASAP1Q9ULH1 1129 aa6.28□□□□□ -1.4
CCDC7-209ENST00000539197 USP19O94966 1318 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 H7C4K7 107 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 AGPSO00116 658 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 RASAL1O95294 804 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 CRYABP02511 175 aaKnown RBP6.27□□□□□ -1.41
CCDC7-209ENST00000539197 HGFP14210 728 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 CREB1P16220 341 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 ME1P48163 572 aa6.27□□□□□ -1.41
CCDC7-209ENST00000539197 NANOS2P60321 138 aaKnown RBP6.27□□□□□ -1.41
CCDC7-209ENST00000539197 RPS13P62277 151 aaKnown RBP6.27□□□□□ -1.41
CCDC7-209ENST00000539197 YPEL5P62699 121 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms