RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 RHOT1Q8IXI2 618 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 FAM149B1Q96BN6 582 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 CRISPLD1Q9H336 500 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 AAASQ9NRG9 546 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 RNF14Q9UBS8 474 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 BACE2Q9Y5Z0 518 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 PATJQ8NI35 1801 aa20.44■□□□□ 0.86
EFCAB11-202ENST00000538485 WDR27A2RRH5 827 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CCDC85CA6NKD9 419 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 TNFRSF10BO14763 440 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 PSTPIP1O43586 416 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 TLL1O43897 1013 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 FBXO21O94952 628 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 PYGMP11217 842 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 GLUD2P49448 558 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CKAP4Q07065 602 aaKnown RBP20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ACAP1Q15027 740 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 DDR2Q16832 855 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 RAB6CQ53S08 254 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 TXNRD3NBQ6F5E7 133 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 SP7Q8TDD2 431 aaPredicted RBP20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 RNPC3Q96LT9 517 aaKnown RBP20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CLSTN3Q9BQT9 956 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 RAB6CQ9H0N0 254 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 USP3Q9Y6I4 520 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CTAGE15A4D2H0 777 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 YJEFN3A6XGL0 299 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 E7ENQ6 273 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 HSF2BPO75031 334 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 FGF18O76093 207 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ZBED1O96006 694 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CTAGE8P0CG41 777 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 SDC4P31431 198 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 OR1D2P34982 312 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 PAFAH1B1P43034 410 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 MAGEA11P43364 429 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 GPR15P49685 360 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 SLC5A3P53794 718 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 YWHAZP63104 245 aaKnown RBP20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ATP11AP98196 1134 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ROR1Q01973 937 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CDO1Q16878 200 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ATP13A4Q4VNC1 1196 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 RASIP1Q5U651 963 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 HFE2Q6ZVN8 426 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 BHLHA9Q7RTU4 235 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CTAGE6Q86UF2 777 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 CTAGE4Q8IX94 777 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 VPS52Q8N1B4 723 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ACTRT1Q8TDG2 376 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 HERC2P3Q9BVR0 1158 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 ASNSD1Q9NWL6 643 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 SLC27A5Q9Y2P5 690 aa20.43■□□□□ 0.86
EFCAB11-202ENST00000538485 DPYSL4O14531 572 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 TADA3O75528 432 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 RNF8O76064 485 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 TFE3P19532 575 aaPredicted RBP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 GTF2F1P35269 517 aaKnown RBP eCLIP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 SLC25A11Q02978 314 aaKnown RBP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 SMARCB1Q12824 385 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 SDHAF4Q5VUM1 108 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 PM20D1Q6GTS8 502 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 ZNF572Q7Z3I7 529 aaPredicted RBP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 SPPL2BQ8TCT7 592 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 ADAM33Q9BZ11 813 aa20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 MTIF3Q9H2K0 278 aaKnown RBP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 V9GYY5 206 aaPredicted RBP20.42■□□□□ 0.86
EFCAB11-202ENST00000538485 CTIFO43310 598 aaKnown RBP20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 SOAT2O75908 522 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 IL1R2P27930 398 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 MIPP30301 263 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 GJC1P36383 396 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 TERF1P54274 439 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 C9orf50Q5SZB4 431 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 LRRC38Q5VT99 294 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 DEFB106AQ8N104 65 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 STKLD1Q8NE28 680 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 SPATA4Q8NEY3 305 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 C8orf48Q96LL4 319 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 C11orf84Q9BUA3 381 aaPredicted RBP20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 DDX23Q9BUQ8 820 aaKnown RBP20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 TTC7AQ9ULT0 858 aaPredicted RBP20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 EFCAB8A8MWE9 144 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 TRIM66O15016 1216 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 FGGP02679 453 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 FYNP06241 537 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 GLI1P08151 1106 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 DNAJB2P25686 324 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 MATKP42679 507 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 PTPN9P43378 593 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 KRT17Q04695 432 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 DUSP4Q13115 394 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 NAA30Q147X3 362 aaPredicted RBP20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 KATNAL2Q8IYT4 538 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 KLHL23Q8NBE8 558 aa20.41■□□□□ 0.86
EFCAB11-202ENST00000538485 FAM172AQ8WUF8 416 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms