RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 CPA5Q8WXQ8 436 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 CPXM1Q96SM3 734 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 PCDHB18PQ96TA0 734 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 DEF6Q9H4E7 631 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 CNGB3Q9NQW8 809 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 SCML2Q9UQR0 700 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 USP3Q9Y6I4 520 aa13.41□□□□□ -0.26
CDK2AP1-204ENST00000538446 NCANO14594 1321 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 E5RJQ4 531 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 PIK3R2O00459 728 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 SART1O43290 800 aaKnown RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 F11P03951 625 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 PLEKP08567 350 aaPredicted RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 USP17L7P0C7H9 530 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 CCR2P41597 374 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 GSDMDP57764 484 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 CDK17Q00537 523 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 CENPCQ03188 943 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 SLC5A9Q2M3M2 681 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 PRSS36Q5K4E3 855 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 PM20D1Q6GTS8 502 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 PTCRAQ6ISU1 281 aaPredicted RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 WDR59Q6PJI9 974 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 GAREM2Q75VX8 874 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 GET4Q7L5D6 327 aaPredicted RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 TMEM110Q86TL2 294 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 MON1AQ86VX9 555 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 SCML4Q8N228 414 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 ARHGAP18Q8N392 663 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 MRPS31Q92665 395 aaKnown RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 PANX2Q96RD6 677 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 ULBP1Q9BZM6 244 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 SLITRK6Q9H5Y7 841 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 TLR8Q9NR97 1041 aaKnown RBP13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.4□□□□□ -0.264e-6■■■■□ 23.3
CDK2AP1-204ENST00000538446 GMIPQ9P107 970 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 ADAMTS1Q9UHI8 967 aa13.4□□□□□ -0.26
CDK2AP1-204ENST00000538446 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 SSU72P8A0A1W2PR75 194 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 FAM170AA1A519 330 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ZNF840PA6NDX5 716 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.274e-10■■□□□ 12
CDK2AP1-204ENST00000538446 GABBR2O75899 941 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ABL1P00519 1130 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 UNGP13051 313 aaPredicted RBP13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 GJA1P17302 382 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 EIF4A3P38919 411 aaKnown RBP13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 PSEN1P49768 467 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 CYP4F8P98187 520 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 TEAD2Q15562 447 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 PTPN20Q4JDL3 420 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ACAD10Q6JQN1 1059 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 OTOP3Q7RTS5 596 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 TMEM150AQ86TG1 271 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 SCUBE3Q8IX30 993 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ITFG1Q8TB96 612 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 SHKBP1Q8TBC3 707 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ING5Q8WYH8 240 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 GOLGA1Q92805 767 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 C18orf8Q96DM3 657 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 CCDC42Q96M95 316 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 ZMYM5Q9UJ78 669 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
CDK2AP1-204ENST00000538446 A0A1W2PQH9 124 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 PAPSS1O43252 624 aaPredicted RBP13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 AKR1B10O60218 316 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 TADA3O75528 432 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 ERBB2P04626 1255 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 CALB1P05937 261 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 GZMAP12544 262 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 CEBPBP17676 345 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 MMP8P22894 467 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 DDX6P26196 483 aaKnown RBP eCLIP13.38□□□□□ -0.273e-10■■■■■ 34.6
CDK2AP1-204ENST00000538446 GBP2P32456 591 aaPredicted RBP13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 GABRB2P47870 512 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 DAOAP59103 153 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 GPR158Q5T848 1215 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 MMS22LQ6ZRQ5 1243 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
CDK2AP1-204ENST00000538446 ATXN2LQ8WWM7 1075 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms