RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OCM2P0CE71 109 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 OCMP0CE72 109 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 ITGA7Q13683 1181 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ACOX1Q15067 660 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 DOK6Q6PKX4 331 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 SV2AQ7L0J3 742 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 MKL1Q969V6 931 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 LENG1Q96BZ8 264 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 PNKPQ96T60 521 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ASPSCR1Q9BZE9 553 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 MRFAP1Q9Y605 127 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 GYG2O15488 501 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ZSCAN9O15535 394 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 ATP8B1O43520 1251 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PSTPIP1O43586 416 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 AOC2O75106 756 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 NPM3O75607 178 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 SETSIPP0DME0 302 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ARFIP2P53365 341 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PPP2R2AP63151 447 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 SPRYD7Q5W111 196 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 WSCD1Q658N2 575 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 UGT3A1Q6NUS8 523 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 FBXO38Q6PIJ6 1188 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 DLK2Q6UY11 383 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 RRM2BQ7LG56 351 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 SCUBE3Q8IX30 993 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 UPF1Q92900 1129 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRP6-203ENST00000538239 NEUROG2Q9H2A3 272 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 INTS13Q9NVM9 706 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 NSMCE4AQ9NXX6 385 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 SLC27A5Q9Y2P5 690 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 MGEA5O60502 916 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 TRIM16O95361 564 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 MAPTP10636 758 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 ITIH2P19823 946 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 FDFT1P37268 417 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 TUFMP49411 452 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 STAT4Q14765 748 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 KCNA10Q16322 511 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 HIST2H2ACQ16777 129 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 CRY2Q49AN0 593 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 HIST2H2AA3Q6FI13 130 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ERAP2Q6P179 960 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 C4orf33Q8N1A6 199 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 IL31RAQ8NI17 732 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 NKX2-3Q8TAU0 364 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CEP41Q9BYV8 373 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 FAM96AQ9H5X1 160 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 SFMBT1Q9UHJ3 866 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 AAR2Q9Y312 384 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 TRAV19A0A0A6YYK7 116 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 A0A1B0GUA9 196 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 TBC1D3BA6NDS4 549 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CXCL14O95715 111 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ERVK-10P10266 1014 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 FGFR1P11362 822 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ITGB6P18564 788 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 POLR2EP19388 210 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 TGM2P21980 687 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 RFC1P35251 1148 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 SPRP35270 261 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 TUBP50607 506 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CENPCQ03188 943 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 POM121L1PQ3SYA9 428 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 TTC39BQ5VTQ0 682 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 RAD9BQ6WBX8 426 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 RGS9BPQ6ZS82 235 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 OTOP2Q7RTS6 562 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 TPCN2Q8NHX9 752 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ELOVL4Q9GZR5 314 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PORCNQ9H237 461 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 KBTBD4Q9NVX7 518 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 MMP3P08254 477 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 RFX3P48380 749 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CUL3Q13618 768 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PDK2Q15119 407 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CLEC16AQ2KHT3 1053 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ZNF697Q5TEC3 545 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 MROH9Q5TGP6 573 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CCDC149Q6ZUS6 474 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 RFX8Q6ZV50 586 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 VSIG10LQ86VR7 867 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PPIL6Q8IXY8 311 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ATG4AQ8WYN0 398 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 KLF6Q99612 283 aaPredicted RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 PRMT1Q99873 361 aaKnown RBP5.55□□□□□ -1.52
LRP6-203ENST00000538239 FTHL17Q9BXU8 183 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 PACSIN1Q9BY11 444 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 BRD8Q9H0E9 1235 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 ATP13A1Q9HD20 1204 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 GIMAP4Q9NUV9 329 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 RNF112Q9ULX5 631 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 GLRA2P23416 452 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 CYP2F1P24903 491 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 KRT72Q14CN4 511 aa5.55□□□□□ -1.52
LRP6-203ENST00000538239 GRAMD1BQ3KR37 738 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms