RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 BRD2P25440 801 aaKnown RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 ELK3P41970 407 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 INHBEP58166 350 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 YWHAEP62258 255 aaKnown RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 DYNLT1P63172 113 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 DBN1Q16643 649 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 GPAT2Q6NUI2 795 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 SLC26A11Q86WA9 606 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 MYLK4Q86YV6 388 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 OR5B17Q8NGF7 314 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 FAM161BQ96MY7 647 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 NMUR2Q9GZQ4 415 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 NIF3L1Q9GZT8 377 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 C12orf65Q9H3J6 166 aaKnown RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 JPH1Q9HDC5 661 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-218ENST00000537641 TAGLN3Q9UI15 199 aa12.67□□□□□ -0.38
CPSF7-218ENST00000537641 A0A0G2JMZ2 1700 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 TCRBV9S1A1TA0A576 114 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 KBTBD13C9JR72 458 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 MAP3K13O43283 966 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 LRCH4O75427 683 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 TM7SF2O76062 418 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 RGS20O76081 388 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 PYGBP11216 843 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 AP2B1P63010 937 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 BASP1P80723 227 aaKnown RBP12.66□□□□□ -0.38
CPSF7-218ENST00000537641 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 LGSNQ5TDP6 509 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 SWSAP1Q6NVH7 229 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 KYAT3Q6YP21 454 aaKnown RBP12.66□□□□□ -0.38
CPSF7-218ENST00000537641 ADGRG6Q86SQ4 1221 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 CCDC60Q8IWA6 550 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-218ENST00000537641 UNC45BQ8IWX7 931 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 SCUBE1Q8IWY4 988 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 FGD4Q96M96 766 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 SIKE1Q9BRV8 207 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 PORCNQ9H237 461 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 C1orf21Q9H246 121 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 ZWILCHQ9H900 591 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 ALG13Q9NP73 1137 aaKnown RBP12.66□□□□□ -0.38
CPSF7-218ENST00000537641 IL1RAPL1Q9NZN1 696 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 PLA2G4CQ9UP65 541 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 TTLL3Q9Y4R7 772 aa12.66□□□□□ -0.38
CPSF7-218ENST00000537641 POLR2AP24928 1970 aaKnown RBP12.66□□□□□ -0.38
CPSF7-218ENST00000537641 B2RBV5 119 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SPATA31C2B4DYI2 1134 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 K7ERI5 159 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 FKBP6O75344 327 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 KRT37O76014 449 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SNRPAP09012 282 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 WEE2P0C1S8 567 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ANPEPP15144 967 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 STIP1P31948 543 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ROR1Q01973 937 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ACAP1Q15027 740 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SURF1Q15526 300 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 KBTBD12Q3ZCT8 623 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 MTERF2Q49AM1 385 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 TMCO4Q5TGY1 634 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 RNF220Q5VTB9 566 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ABHD15Q6UXT9 468 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 TTC7BQ86TV6 843 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 DTX3LQ8TDB6 740 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SRPK1Q96SB4 655 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 LHX5Q9H2C1 402 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 CISHQ9NSE2 258 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SORCS3Q9UPU3 1222 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 FAM237BA0A1B0GVD1 139 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 H3BRJ5 948 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
CPSF7-218ENST00000537641 MED7O43513 233 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 UPP2O95045 317 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SUPT20HL2P0C7V6 817 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 RBP3P10745 1247 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 KRT3P12035 628 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 AMPD1P23109 780 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 IL1R2P27930 398 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 CRABP2P29373 138 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ARL2P36404 184 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ACTR3P61158 418 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ACTR2P61160 394 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 DSG1Q02413 1049 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 NOMO1Q15155 1222 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 SUPT20HL1Q3ZLR7 823 aa12.65□□□□□ -0.38
CPSF7-218ENST00000537641 ZBTB41Q5SVQ8 909 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms