RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 EMILIN2Q9BXX0 1053 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 UBXN6Q9BZV1 441 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 NGRNQ9NPE2 291 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 PARVAQ9NVD7 372 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 ATG2AQ2TAZ0 1938 aa16.46■□□□□ 0.22
SFSWAP-206ENST00000537582 YJEFN3A6XGL0 299 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 E7ENQ6 273 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 TRIM66O15016 1216 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 ADH1AP07327 375 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 RFC1P35251 1148 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 GSCP56915 257 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 DAOAP59103 153 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 SLC6A3Q01959 620 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 NYAP1Q6ZVC0 841 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 RHOT2Q8IXI1 618 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 TXLNBQ8N3L3 684 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 FEZF2Q8TBJ5 459 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 WDR24Q96S15 920 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 SELENOOQ9BVL4 669 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 PNPLA8Q9NP80 782 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 CYLDQ9NQC7 956 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 ANAPC7Q9UJX3 599 aa16.45■□□□□ 0.22
SFSWAP-206ENST00000537582 MYO7AQ13402 2215 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 GOLGA6L9A6NEM1 432 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 TMEM191CA6NGB0 347 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 PRRG1O14668 218 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 CLASP2O75122 1294 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 PALMO75781 387 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 MTA2O94776 668 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 ZBED1O96006 694 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 KRT3P12035 628 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 EPCAMP16422 314 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 FLT3P36888 993 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 CLCN4P51793 760 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 MRPS5P82675 430 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 TCEAL1Q15170 157 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 ZNF569Q5MCW4 686 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 SLC35F6Q8N357 371 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 SLC7A14Q8TBB6 771 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 UVRAGQ9P2Y5 699 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 TMEM59LQ9UK28 342 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 FBXW11Q9UKB1 542 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 INSL5Q9Y5Q6 135 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 USP3Q9Y6I4 520 aa16.44■□□□□ 0.22
SFSWAP-206ENST00000537582 SIGLEC16A6NMB1 481 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 SLC38A8A6NNN8 435 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 GNG11P61952 73 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 TWF1Q12792 350 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 MESDQ14696 234 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 TCEAL8Q8IYN2 117 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 LRRC57Q8N9N7 239 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 KREMEN2Q8NCW0 462 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 SCINQ9Y6U3 715 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 KIF5CO60282 957 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 FTCDO95954 541 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 GLUD1P00367 558 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 FYNP06241 537 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 TFE3P19532 575 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 ELF1P32519 619 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 TUFMP49411 452 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 RPL10AP62906 217 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 PM20D1Q6GTS8 502 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 DCUN1D2Q6PH85 259 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 SLC26A9Q7LBE3 791 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 SCD5Q86SK9 330 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 FAM149B1Q96BN6 582 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 SPATA17Q96L03 361 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 ADAM33Q9BZ11 813 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 ZNF576Q9H609 170 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 NMUR1Q9HB89 426 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 MRPL47Q9HD33 250 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 CNGB3Q9NQW8 809 aa16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 MAGED2Q9UNF1 606 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-206ENST00000537582 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 NCK2O43639 380 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 C8AP07357 584 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 HADHBP55084 474 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 PITX1P78337 314 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 LRIT3Q3SXY7 679 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 SH3PXD2AQ5TCZ1 1133 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 ZDHHC17Q8IUH5 632 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 RNF10Q8N5U6 811 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 SLC22A17Q8WUG5 538 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 EDEM1Q92611 657 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 TTYH1Q9H313 450 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 OSER1Q9NX31 292 aa16.42■□□□□ 0.22
SFSWAP-206ENST00000537582 IL37Q9NZH6 218 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms