RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NATD1Q8N6N6 113 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 LARP4BQ92615 738 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF486Q96H40 463 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 RILPQ96NA2 401 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 COQ7Q99807 217 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 AIFM2Q9BRQ8 373 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 DNAJC12Q9UKB3 198 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ATAD5Q96QE3 1844 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 IGSF9BQ9UPX0 1349 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 TCRBV7S2A1N4TA0A589 114 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 C2orf71A6NGG8 1288 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 DDHD2O94830 711 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 KLHL2O95198 593 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 OR52Z1P0C646 297 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 MCF2P10911 925 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 FOSL1P15407 271 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 TNFAIP3P21580 790 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 BDNFP23560 247 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 RFC1P35251 1148 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 NDST2P52849 883 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 STX3Q13277 289 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PCSK7Q16549 785 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PPM1LQ5SGD2 360 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SLX4IPQ5VYV7 408 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 NXNQ6DKJ4 435 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PPP4R3CPQ6ZMV5 832 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 TICAM1Q8IUC6 712 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 HACE1Q8IYU2 909 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC38A6Q8IZM9 456 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 FBXW8Q8N3Y1 598 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ZCCHC9Q8N567 271 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 DPF3Q92784 378 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 FRMD8Q9BZ67 464 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 THAP2Q9H0W7 228 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 RPF2Q9H7B2 306 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 RMND5AQ9H871 391 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 KANSL2Q9H9L4 492 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 EPB41L4AQ9HCS5 686 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SEPT10Q9P0V9 454 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PTBP2Q9UKA9 531 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 DNM3Q9UQ16 869 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 CNTNAP5Q8WYK1 1306 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ARHGEF37A1IGU5 675 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SCO2O43819 266 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 DDAH1O94760 285 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ATE1O95260 518 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 BTDP43251 543 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ALDH18A1P54886 795 aaKnown RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PEX3P56589 373 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 STX1BP61266 288 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 GRIK5Q16478 980 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ZNF530Q6P9A1 599 aaPredicted RBP8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC30A10Q6XR72 485 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 PDPRQ8NCN5 879 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ARHGEF26Q96DR7 871 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 ERLEC1Q96DZ1 483 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 DOK1Q99704 481 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SMARCAD1Q9H4L7 1026 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 VPS37BQ9H9H4 285 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SAYSD1Q9NPB0 183 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 C12orf4Q9NQ89 552 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SH3GLB2Q9NR46 395 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 FETUBQ9UGM5 382 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 SPEF1Q9Y4P9 236 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 TACC3Q9Y6A5 838 aa8.85□□□□□ -0.99
SRGAP1-202ENST00000537556 NWD1Q149M9 1564 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CHD4Q14839 1912 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 C1orf232A0A0U1RR37 186 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 H3BMQ9 156 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 FSCN2O14926 492 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ATP2A1O14983 1001 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 RNMTO43148 476 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 GABBR2O75899 941 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 DLATP10515 647 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 KRT3P12035 628 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 COMTP21964 271 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 MARCKSL1P49006 195 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 P2RX3P56373 397 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 BNIP3Q12983 259 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 TCEAL1Q15170 157 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 NFE2Q16621 373 aaPredicted RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 IZUMO3Q5VZ72 239 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ATG16L1Q676U5 607 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 FRMD5Q7Z6J6 570 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 IGFN1Q86VF2 1251 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 CHERPQ8IWX8 916 aaKnown RBP8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 MIGA1Q8NAN2 632 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 C1orf54Q8WWF1 131 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 COG8Q96MW5 612 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 PWWP2AQ96N64 755 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 ALPK1Q96QP1 1244 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 YME1L1Q96TA2 773 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 HERC2P3Q9BVR0 1158 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 OSBPL11Q9BXB4 747 aa8.84□□□□□ -0.99
SRGAP1-202ENST00000537556 B3GNT4Q9C0J1 378 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms