RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 P3H4Q92791 437 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 SEC16BQ96JE7 1060 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 ZNF317Q96PQ6 595 aaPredicted RBP16.36■□□□□ 0.21
MKS1-204ENST00000537529 RNF157Q96PX1 679 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 PRMT1Q99873 361 aaKnown RBP16.36■□□□□ 0.21
MKS1-204ENST00000537529 C10orf88Q9H8K7 445 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 VPS37BQ9H9H4 285 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 IPPQ9Y573 584 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 TRIM66O15016 1216 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 PDGFRBP09619 1106 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 FGFR1P11362 822 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 CCDC130P13994 396 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 TGM2P21980 687 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 HOXC8P31273 242 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 STIP1P31948 543 aaKnown RBP16.36■□□□□ 0.21
MKS1-204ENST00000537529 PTPN9P43378 593 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 ACADSBP45954 432 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 RAB6CQ53S08 254 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 DARS2Q6PI48 645 aaKnown RBP16.36■□□□□ 0.21
MKS1-204ENST00000537529 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 TDRPQ86YL5 185 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 OTUD6BQ8N6M0 293 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 NAT8LQ8N9F0 302 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 DYDC1Q8WWB3 177 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 NSRP1Q9H0G5 558 aaKnown RBP16.36■□□□□ 0.21
MKS1-204ENST00000537529 RAB6CQ9H0N0 254 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 EURLQ9NYK6 297 aa16.36■□□□□ 0.21
MKS1-204ENST00000537529 APOL1O14791 398 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 SPTLC1O15269 473 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 HUS1O60921 280 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 BRAFP15056 766 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 PURAQ00577 322 aaKnown RBP16.35■□□□□ 0.21
MKS1-204ENST00000537529 FASTKD3Q14CZ7 662 aaKnown RBP16.35■□□□□ 0.21
MKS1-204ENST00000537529 TMED2Q15363 201 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 TAF2Q6P1X5 1199 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 SLC26A9Q7LBE3 791 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 LIMS2Q7Z4I7 341 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 TADA2BQ86TJ2 420 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 ADGRF2Q8IZF7 708 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 KHSRPQ92945 711 aaKnown RBP eCLIP16.35■□□□□ 0.21
MKS1-204ENST00000537529 TNIP3Q96KP6 325 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 KCNK9Q9NPC2 374 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 TBK1Q9UHD2 729 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 SCN1AP35498 2009 aa16.35■□□□□ 0.21
MKS1-204ENST00000537529 PDCD11Q14690 1871 aaKnown RBP16.35■□□□□ 0.21
MKS1-204ENST00000537529 ZNF487B1APH4 448 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 GOLGA8MH3BSY2 632 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 TNPO2O14787 897 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 MDM4O15151 490 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 KPNA6O60684 536 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 GABBR2O75899 941 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 AKR1A1P14550 325 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 PHBP35232 272 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 IFNAR2P48551 515 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 ANKRD22Q5VYY1 191 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 TWF2Q6IBS0 349 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 NPNTQ6UXI9 565 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 ARCQ7LC44 396 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 CYP4X1Q8N118 509 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 SMG8Q8ND04 991 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 LPIN3Q9BQK8 851 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 SNRNP25Q9BV90 132 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 PCDH18Q9HCL0 1135 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 GPATCH2LQ9NWQ4 482 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 CFAP69A5D8W1 941 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 H7C0C1 242 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 M0QZ92 97 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 HCRTO43612 131 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 IGHA2P01877 340 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 WARSP23381 471 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 ATP5OP48047 213 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 RPL34P49207 117 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 SOX4Q06945 474 aaPredicted RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 IFT88Q13099 833 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 HP1BP3Q5SSJ5 553 aaPredicted RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 C1orf228Q6PIY5 440 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 C6orf89Q6UWU4 347 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 SRRM1Q8IYB3 904 aaKnown RBP16.34■□□□□ 0.21
MKS1-204ENST00000537529 TOP6BLQ8N6T0 577 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 ATP11CQ8NB49 1132 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 PPM1EQ8WY54 764 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 CABS1Q96KC9 395 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 ZNF670Q9BS34 389 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 B3GNT5Q9BYG0 378 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 NKIRAS1Q9NYS0 192 aa16.34■□□□□ 0.21
MKS1-204ENST00000537529 LMO2P25791 158 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 BASP1P80723 227 aaKnown RBP16.33■□□□□ 0.21
MKS1-204ENST00000537529 RNASELQ05823 741 aaKnown RBP16.33■□□□□ 0.21
MKS1-204ENST00000537529 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.21
MKS1-204ENST00000537529 RNF187Q5TA31 235 aaPredicted RBP16.33■□□□□ 0.21
MKS1-204ENST00000537529 ZC3H18Q86VM9 953 aaKnown RBP16.33■□□□□ 0.21
MKS1-204ENST00000537529 FAM228AQ86W67 206 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 LRRC34Q8IZ02 419 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 ANKRD42Q8N9B4 389 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms