RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 NFE2L3Q9Y4A8 694 aa18.27■□□□□ 0.52
GPN3-202ENST00000537466 F5P12259 2224 aa18.27■□□□□ 0.51
GPN3-202ENST00000537466 MYOFQ9NZM1 2061 aa18.27■□□□□ 0.51
GPN3-202ENST00000537466 MUC6Q6W4X9 2439 aa18.27■□□□□ 0.51
GPN3-202ENST00000537466 KCNJ18B7U540 433 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 TULP2O00295 520 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 CYP26A1O43174 497 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 VDRP11473 427 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 GLULP15104 373 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
GPN3-202ENST00000537466 PDE6CP51160 858 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 KIF11P52732 1056 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 SLC7A9P82251 487 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 PLCB2Q00722 1185 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 KCNJ12Q14500 433 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 ZNF852Q6ZMS4 543 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 GBP6Q6ZN66 633 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 CCDC105Q8IYK2 499 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
GPN3-202ENST00000537466 TUBGCP2Q9BSJ2 902 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 KCNH6Q9H252 994 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 EBF3Q9H4W6 596 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 UBE2TQ9NPD8 197 aaPredicted RBP18.26■□□□□ 0.51
GPN3-202ENST00000537466 HPS4Q9NQG7 708 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 SMPD4Q9NXE4 827 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 DLGAP2Q9P1A6 1054 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 SCML2Q9UQR0 700 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 CPQQ9Y646 472 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 GTPBP10A4D1E9 387 aaKnown RBP18.26■□□□□ 0.51
GPN3-202ENST00000537466 OTOL1A6NHN0 477 aaPredicted RBP18.26■□□□□ 0.51
GPN3-202ENST00000537466 FAM170BA6NMN3 283 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 LEFTY2O00292 366 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 O00370 1275 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 COCHO43405 550 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 PAEPP09466 180 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 PRKCSHP14314 528 aaPredicted RBP18.26■□□□□ 0.51
GPN3-202ENST00000537466 TCF3P15923 654 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 PON1P27169 355 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 ZNF132P52740 706 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 PDE4CQ08493 712 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 TCF15Q12870 199 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 STX1AQ16623 288 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 EXOC3L4Q17RC7 722 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 VWA3BQ502W6 1294 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 HECTD3Q5T447 861 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 PIGZQ86VD9 579 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 NDST4Q9H3R1 872 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 ANO10Q9NW15 660 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 OSER1Q9NX31 292 aa18.26■□□□□ 0.51
GPN3-202ENST00000537466 MBL2P11226 248 aaPredicted RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 ARSAP15289 507 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 BRD2P25440 801 aaKnown RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 KPNA1P52294 538 aaPredicted RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 TCP11X2Q5H9J9 407 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 CC2D1AQ6P1N0 951 aaPredicted RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 TXNDC11Q6PKC3 985 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 ZNF687Q8N1G0 1237 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 UBA3Q8TBC4 463 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 FAM3CQ92520 227 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 NMUR1Q9HB89 426 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 SIX2Q9NPC8 291 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 TLR8Q9NR97 1041 aaKnown RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 KIAA1257Q9ULG3 409 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 NDRG2Q9UN36 371 aaKnown RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 ARIH1Q9Y4X5 557 aaPredicted RBP18.25■□□□□ 0.51
GPN3-202ENST00000537466 WNT6Q9Y6F9 365 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 USP3Q9Y6I4 520 aa18.25■□□□□ 0.51
GPN3-202ENST00000537466 SPECC1L-ADORA2AF8WAN1 911 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 MAN2B1O00754 1011 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 GALR2O43603 387 aaPredicted RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 CTHP32929 405 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 TUBP50607 506 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 BCAT1P54687 386 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 MLLT6P55198 1093 aaPredicted RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 FZD5Q13467 585 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 RUNX3Q13761 415 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 ITPRIPL2Q3MIP1 535 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 PKDCCQ504Y2 493 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 RAB41Q5JT25 222 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 CDKAL1Q5VV42 579 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 DTWD2Q8NBA8 298 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 OSCP1Q8WVF1 389 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 ZFRQ96KR1 1074 aaKnown RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 UBXN6Q9BZV1 441 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 DUS2Q9NX74 493 aaKnown RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 HESX1Q9UBX0 185 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 APEX2Q9UBZ4 518 aa18.24■□□□□ 0.51
GPN3-202ENST00000537466 AJAP1Q9UKB5 411 aaPredicted RBP18.24■□□□□ 0.51
GPN3-202ENST00000537466 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.24■□□□□ 0.51
GPN3-202ENST00000537466 A0A1W2PQH9 124 aa18.23■□□□□ 0.51
GPN3-202ENST00000537466 SCAMP3O14828 347 aaKnown RBP18.23■□□□□ 0.51
GPN3-202ENST00000537466 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
GPN3-202ENST00000537466 TLR5O60602 858 aa18.23■□□□□ 0.51
GPN3-202ENST00000537466 TBX18O95935 607 aa18.23■□□□□ 0.51
GPN3-202ENST00000537466 KRT5P13647 590 aa18.23■□□□□ 0.51
GPN3-202ENST00000537466 EEF1GP26641 437 aaKnown RBP18.23■□□□□ 0.51
GPN3-202ENST00000537466 NUBP1P53384 320 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms