RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZC3H12AQ5D1E8 599 aaKnown RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 RASAL3Q86YV0 1011 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 LRRC34Q8IZ02 419 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PLD5Q8N7P1 536 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CKAP2Q8WWK9 683 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PRPF4O43172 522 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBE3B-207ENST00000537063 TREHO43280 583 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 TMEM63AO94886 807 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 FAM163BP0C2L3 166 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 CDH6P55285 790 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 HDAC4P56524 1084 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 ROR1Q01973 937 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 GPR162Q16538 588 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 MSS51Q4VC12 460 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 C17orf99Q6UX52 265 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 SPATA18Q8TC71 538 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 RSAD2Q8WXG1 361 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 KATNAL1Q9BW62 490 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 USP29Q9HBJ7 922 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 FAM49BQ9NUQ9 324 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 EXOC1LA0A1B0GW35 172 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 KPNA7A9QM74 516 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 KIAA0754O94854 1291 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 RBP3P10745 1247 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 WARSP23381 471 aaKnown RBP9.72□□□□□ -0.85
UBE3B-207ENST00000537063 LRPAP1P30533 357 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 ARL4CP56559 192 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 PPARDQ03181 441 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 GAD2Q05329 585 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
UBE3B-207ENST00000537063 PDIA2Q13087 525 aaKnown RBP9.72□□□□□ -0.85
UBE3B-207ENST00000537063 GLRA4Q5JXX5 417 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 FNBP1LQ5T0N5 605 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 CPLX4Q7Z7G2 160 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 ZBED8Q8IZ13 594 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 FAM172AQ8WUF8 416 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 APBA2Q99767 749 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 CALN1Q9BXU9 219 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 C10orf88Q9H8K7 445 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 SSU72Q9NP77 194 aaKnown RBP9.72□□□□□ -0.85
UBE3B-207ENST00000537063 HESX1Q9UBX0 185 aa9.72□□□□□ -0.85
UBE3B-207ENST00000537063 PIN4Q9Y237 131 aaKnown RBP9.72□□□□□ -0.85
UBE3B-207ENST00000537063 XPOTO43592 962 aaKnown RBP9.71□□□□□ -0.85
UBE3B-207ENST00000537063 IFNB1P01574 187 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 BRAFP15056 766 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 AKAP5P24588 427 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 SDC4P31431 198 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 SLC20A2Q08357 652 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 DPYSL2Q16555 572 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 CCL14Q16627 93 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 ANKRD20A8PQ5CZ79 823 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 DPH6Q7L8W6 267 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 BNIPLQ7Z465 357 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 MAP7D3Q8IWC1 876 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 TOP6BLQ8N6T0 577 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 FAM71DQ8N9W8 422 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 DENND1AQ8TEH3 1009 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 CCT6BQ92526 530 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 SNRNP25Q9BV90 132 aaKnown RBP9.71□□□□□ -0.85
UBE3B-207ENST00000537063 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 OSBPL7Q9BZF2 842 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 SENP1Q9P0U3 644 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 RABGEF1Q9UJ41 708 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 IPPQ9Y573 584 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.71□□□□□ -0.85
UBE3B-207ENST00000537063 TCRBV7S3A2A0A539 114 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 BCLAF3A2AJT9 711 aaKnown RBP9.71□□□□□ -0.85
UBE3B-207ENST00000537063 CFAP69A5D8W1 941 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 MANSC4A6NHS7 340 aaPredicted RBP9.71□□□□□ -0.85
UBE3B-207ENST00000537063 PIK3R2O00459 728 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 CHADO15335 359 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 HCRTO43612 131 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 GHRP10912 638 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 PURAQ00577 322 aaKnown RBP9.71□□□□□ -0.85
UBE3B-207ENST00000537063 IFT88Q13099 833 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 SV2CQ496J9 727 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 NPNTQ6UXI9 565 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 OTUD6BQ8N6M0 293 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 OR6B3Q8NGW1 331 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 HSFY1Q96LI6 401 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 RNF39Q9H2S5 420 aa9.71□□□□□ -0.85
UBE3B-207ENST00000537063 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 A8MXQ7 604 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 FOXO6A8MYZ6 492 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 GRAP2O75791 330 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 ACADSBP45954 432 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 TAF6P49848 677 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 ZNF200P98182 395 aaPredicted RBP9.71□□□□□ -0.86
UBE3B-207ENST00000537063 CA9Q16790 459 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 SCUBE3Q8IX30 993 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 CCDC13Q8IYE1 715 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 ATP11CQ8NB49 1132 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 ARRDC4Q8NCT1 418 aa9.71□□□□□ -0.86
UBE3B-207ENST00000537063 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms