RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SKA1Q96BD8 255 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 IFT43Q96FT9 208 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 DDX27Q96GQ7 796 aaKnown RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 OXNAD1Q96HP4 312 aaPredicted RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 NECAB3Q96P71 396 aaPredicted RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 ECSITQ9BQ95 431 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 SYT15Q9BQS2 421 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 DHRS4Q9BTZ2 278 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 RUSC1Q9BVN2 902 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 IDI2Q9BXS1 227 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 MAK16Q9BXY0 300 aaKnown RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 CADM1Q9BY67 442 aaKnown RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 TMEM117Q9H0C3 514 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.44
CHD4-206ENST00000536999 GOLPH3Q9H4A6 298 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 NRDE2Q9H7Z3 1164 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 NPHS2Q9NP85 383 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 TAS2R1Q9NYW7 299 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 TBK1Q9UHD2 729 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 ITGA11Q9UKX5 1188 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 CNOT11Q9UKZ1 510 aaKnown RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 PRPF19Q9UMS4 504 aaKnown RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 GABRQQ9UN88 632 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 AGTPBP1Q9UPW5 1226 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 CSADQ9Y600 493 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 SNCAIPQ9Y6H5 919 aa6.07□□□□□ -1.44
CHD4-206ENST00000536999 BAZ2AQ9UIF9 1905 aaKnown RBP6.07□□□□□ -1.44
CHD4-206ENST00000536999 A0A0G2JND7 137 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ZNF487B1APH4 448 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 B2RBV5 119 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 KBTBD13C9JR72 458 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ZNF701M0R085 212 aaPredicted RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 SGK1O00141 431 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 MCF2LO15068 1137 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
CHD4-206ENST00000536999 CHADO15335 359 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 TLR3O15455 904 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 DENRO43583 198 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 EDIL3O43854 480 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 EXTL3O43909 919 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 OPHN1O60890 802 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 PFDN1O60925 122 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ENTPD3O75355 529 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ENTPD5O75356 428 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 STAM2O75886 525 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 APOA4P06727 396 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 DHRS4L1P0CG22 281 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 AKR1B1P15121 316 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ANPEPP15144 967 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 DNAJB1P25685 340 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 NMT1P30419 496 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 RFC5P40937 340 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 HADHAP40939 763 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 GCLMP48507 274 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 FLT3LGP49771 235 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 CHN2P52757 468 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 NUP107P57740 925 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 NLRP11P59045 1033 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 PSMC6P62333 389 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ESRRGP62508 458 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 CLDN10P78369 228 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 MAP3K10Q02779 954 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 PDIA2Q13087 525 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 SNAPC2Q13487 334 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 SNX1Q13596 522 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 VGLL4Q14135 290 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 GRM2Q14416 872 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 PRKD1Q15139 912 aaPredicted RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 MAPK6Q16659 721 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 CCDC142Q17RM4 750 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 CTC1Q2NKJ3 1217 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 MMEL1Q495T6 779 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ANKRD20A4Q4UJ75 823 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 CFAP157Q5JU67 520 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 EFHC1Q5JVL4 640 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 DACT2Q5SW24 774 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ACBD5Q5T8D3 534 aaPredicted RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 RNASEH2BQ5TBB1 312 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 TATDN1Q6P1N9 297 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 DCUN1D2Q6PH85 259 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 C16orf89Q6UX73 402 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 TIFABQ6ZNK6 161 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 MIER3Q7Z3K6 550 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 HAUS6Q7Z4H7 955 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 MYLK4Q86YV6 388 aaPredicted RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 KIAA0825Q8IV33 1275 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 MAP4K3Q8IVH8 894 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 CDAN1Q8IWY9 1227 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 HOMEZQ8IX15 550 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 HACE1Q8IYU2 909 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 GPD1LQ8N335 351 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 SLC44A5Q8NCS7 719 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 PPP1R14CQ8TAE6 165 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 UHMK1Q8TAS1 419 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 PXYLP1Q8TE99 480 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 RSPH1Q8WYR4 309 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 ATP6V0A1Q93050 837 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 UTP4Q969X6 686 aaKnown RBP6.06□□□□□ -1.44
CHD4-206ENST00000536999 E2F7Q96AV8 911 aa6.06□□□□□ -1.44
CHD4-206ENST00000536999 DYDC2Q96IM9 177 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms