RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 EHD2Q9NZN4 543 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 NXF1Q9UBU9 619 aaKnown RBP13.23□□□□□ -0.29
PRKDC-207ENST00000536483 COQ4Q9Y3A0 265 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 SPAG17Q6Q759 2223 aa13.23□□□□□ -0.29
PRKDC-207ENST00000536483 ZNF638Q14966 1978 aaKnown RBP13.22□□□□□ -0.29
PRKDC-207ENST00000536483 A8MXQ7 604 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 TM4SF5O14894 197 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 TRIM66O15016 1216 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 PMM2O15305 246 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 STX10O60499 249 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 TCF3P15923 654 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 BMP6P22004 513 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 BDNFP23560 247 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 ASPAP45381 313 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 PPP3CCP48454 512 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 PMS1P54277 932 aaKnown RBP13.22□□□□□ -0.29
PRKDC-207ENST00000536483 CDH8P55286 799 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
PRKDC-207ENST00000536483 UBE2HP62256 183 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 MORC3Q14149 939 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 ZNF77Q15935 545 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 ST3GAL2Q16842 350 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 KRT39Q6A163 491 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 PAQR9Q6ZVX9 377 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 SCN4BQ8IWT1 228 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 RPLP0P6Q8NHW5 317 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 TAS1R2Q8TE23 839 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 OSCP1Q8WVF1 389 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-207ENST00000536483 B3GNT5Q9BYG0 378 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
PRKDC-207ENST00000536483 MAN1B1Q9UKM7 699 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 WNT6Q9Y6F9 365 aa13.22□□□□□ -0.29
PRKDC-207ENST00000536483 TRAV19A0A0A6YYK7 116 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 PPP1R3GB7ZBB8 358 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 CKMP06732 381 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 USP17L7P0C7H9 530 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
PRKDC-207ENST00000536483 MPLP40238 635 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 GCLMP48507 274 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 IFNAR2P48551 515 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 PLK5Q496M5 336 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 MDH1BQ5I0G3 518 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 STPG1Q5TH74 334 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 DENND5BQ6ZUT9 1274 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
PRKDC-207ENST00000536483 TRIML1Q8N9V2 468 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 CD101Q93033 1021 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 ZC3H10Q96K80 434 aaKnown RBP13.21□□□□□ -0.29
PRKDC-207ENST00000536483 CEP63Q96MT8 703 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 TSG101Q99816 390 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.29
PRKDC-207ENST00000536483 CSNK1G1Q9HCP0 422 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 TMEM30AQ9NV96 361 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 PCDHGA5Q9Y5G8 931 aa13.21□□□□□ -0.29
PRKDC-207ENST00000536483 GREB1Q4ZG55 1949 aa13.21□□□□□ -0.3
PRKDC-207ENST00000536483 OBSL1O75147 1896 aa13.21□□□□□ -0.3
PRKDC-207ENST00000536483 LAMA1P25391 3075 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 PSMA7O14818 248 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 DCLK1O15075 740 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
PRKDC-207ENST00000536483 GRIK1P39086 918 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 CYP27A1Q02318 531 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 USP4Q13107 963 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 STIM1Q13586 685 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 DMC1Q14565 340 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 EML3Q32P44 896 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-207ENST00000536483 SNX30Q5VWJ9 437 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 SYT13Q7L8C5 426 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 OVCA2Q8WZ82 227 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-207ENST00000536483 ATP2A3Q93084 1043 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 IMPG2Q9BZV3 1241 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-207ENST00000536483 LINC00597Q9H2U6 94 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 METTL14Q9HCE5 456 aaKnown RBP13.2□□□□□ -0.3
PRKDC-207ENST00000536483 CFAP47Q6ZTR5 3102 aa13.2□□□□□ -0.3
PRKDC-207ENST00000536483 F8VP50 259 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms