RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PPM1LQ5SGD2 360 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 PHF13Q86YI8 300 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-205ENST00000535900 OLIG1Q8TAK6 271 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-205ENST00000535900 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 RTP3Q9BQQ7 232 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 STRIP2Q9ULQ0 834 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 VWA8A3KMH1 1905 aa11.38□□□□□ -0.59
UBE3B-205ENST00000535900 TSC2P49815 1807 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 A0A0A6YYK5 440 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 USP27XA6NNY8 438 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 I3L4J1 428 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 ZNF263O14978 683 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 TBC1D4O60343 1298 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 XYLBO75191 536 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 MICAL2O94851 1124 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 FTLP02792 175 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 SRFP11831 508 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 FSHRP23945 695 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 IGFBP6P24592 240 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 ACADSBP45954 432 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 NOMO3P69849 1222 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 TCEAL1Q15170 157 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 IFI16Q16666 785 aaKnown RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 CTXN3Q4LDR2 81 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 ARHGAP29Q52LW3 1261 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PPP1R26Q5T8A7 1209 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 SLC8B1Q6J4K2 584 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 RNF10Q8N5U6 811 aaKnown RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 SLC7A14Q8TBB6 771 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 CTNNBL1Q8WYA6 563 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 NXPE3Q969Y0 559 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 SMARCD1Q96GM5 515 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 HSFY1Q96LI6 401 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PCDHB18PQ96TA0 734 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PKMYT1Q99640 499 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 ZSWIM1Q9BR11 485 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PNPLA8Q9NP80 782 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 ACP6Q9NPH0 428 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 CRTAC1Q9NQ79 661 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 AVENQ9NQS1 362 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 TRMT1Q9NXH9 659 aaKnown RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 WDR35Q9P2L0 1181 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 MTRRQ9UBK8 725 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 TSPAN16Q9UKR8 245 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 NME7Q9Y5B8 376 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 TIMM13Q9Y5L4 95 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-205ENST00000535900 NUMBLQ9Y6R0 609 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 DOCK8Q8NF50 2099 aa11.37□□□□□ -0.59
UBE3B-205ENST00000535900 PRR23AA6NEV1 266 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 M0QYV0 167 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 CCL16O15467 120 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 KIF5CO60282 957 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 HNRNPA1P09651 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 FAM200BP0CF97 657 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 NPR3P17342 541 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 MMP8P22894 467 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 NBL1P41271 181 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 GPD2P43304 727 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 MAGEA11P43364 429 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 RPL34P49207 117 aaKnown RBP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 GSCP56915 257 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 GPC5P78333 572 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 CYP27A1Q02318 531 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 GPR17Q13304 367 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 HTR4Q13639 388 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 GOLGA7BQ2TAP0 167 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 TPGS2Q68CL5 300 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 LILRA6Q6PI73 481 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 VSTM1Q6UX27 236 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 ERICH1Q86X53 443 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 ZDHHC17Q8IUH5 632 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 RHOT2Q8IXI1 618 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 MCOLN2Q8IZK6 566 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 FUKQ8N0W3 1084 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 C17orf53Q8N3J3 647 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 ACRBPQ8NEB7 543 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 SPPL2BQ8TCT7 592 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 SLC2A14Q8TDB8 520 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 NKD2Q969F2 451 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-205ENST00000535900 CLSTN3Q9BQT9 956 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 DESI2Q9BSY9 194 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 DPEP3Q9H4B8 488 aa11.36□□□□□ -0.59
UBE3B-205ENST00000535900 TBC1D17Q9HA65 648 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms