RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 DSCC1Q9BVC3 393 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 KATNAL1Q9BW62 490 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 GON7Q9BXV9 100 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 TRIM55Q9BYV6 548 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 DPEP3Q9H4B8 488 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 CCDC86Q9H6F5 360 aaKnown RBP5.43□□□□□ -1.54
SNHG1-201ENST00000535076 RNPEPL1Q9HAU8 725 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 RASSF1Q9NS23 344 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 FAM105AQ9NUU6 356 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 PANK4Q9NVE7 773 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 ETNK2Q9NVF9 386 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 GGA3Q9NZ52 723 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 SENP1Q9P0U3 644 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 ARHGAP28Q9P2N2 729 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 UBA2Q9UBT2 640 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-201ENST00000535076 TAGLN3Q9UI15 199 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 NUP50Q9UKX7 468 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 HIF3AQ9Y2N7 669 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 AP3M1Q9Y2T2 418 aa5.43□□□□□ -1.54
SNHG1-201ENST00000535076 CFAP74Q9C0B2 1584 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 FAM135BQ49AJ0 1406 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CLTCL1P53675 1640 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 HEATR9A2RTY3 570 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 EFCAB10A6NFE3 127 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ZSCAN5BA6NJL1 495 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 DBX1A6NMT0 343 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 TRIM77I1YAP6 450 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 UBXN8O00124 270 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GSC2O15499 205 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PI15O43692 258 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GREM1O60565 184 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 TOM1L1O75674 476 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ALDH1L1O75891 902 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GAS8O95995 478 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 HRGP04196 525 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ATP5BP06576 529 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 S100A9P06702 114 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 COL6A2P12110 1019 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 DNAJB1P25685 340 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 SERPINB3P29508 390 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ADSLP30566 484 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 SHMT1P34896 483 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 RFC4P35249 363 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 HOXD13P35453 343 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MTIF2P46199 727 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF165P49910 485 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CLCN4P51793 760 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 FCGRTP55899 365 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 TSPAN5P62079 268 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 VSNL1P62760 191 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CSNK2BP67870 215 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 OTUD4Q01804 1114 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 RNASELQ05823 741 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 FMR1Q06787 632 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PRKG2Q13237 762 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ME3Q16798 604 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 TMEM266Q2M3C6 531 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 AARDQ4LEZ3 155 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 XKR3Q5GH77 459 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 WASHC2DQ5SRD0 308 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 C6orf10Q5SRN2 563 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GTF2IRD2BQ6EKJ0 949 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 RWDD4Q6NW29 188 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 LRRC8BQ6P9F7 803 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PGM2L1Q6PCE3 622 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CNSTQ6PJW8 725 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 NXPE4Q6UWF7 544 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MACC1Q6ZN28 852 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 BRINP3Q76B58 766 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 LPCAT2Q7L5N7 544 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 SLC9B2Q86UD5 537 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 GTF2IRD2Q86UP8 949 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 COMTD1Q86VU5 262 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 TSPYL5Q86VY4 417 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CAMK1DQ8IU85 385 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 HID1Q8IV36 788 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CCDC28AQ8IWP9 274 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CNTROBQ8N137 903 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CCNYL1Q8N7R7 359 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ANKRD42Q8N9B4 389 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 NAT8LQ8N9F0 302 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ZBTB38Q8NAP3 1195 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MINDY2Q8NBR6 621 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 C3orf58Q8NDZ4 430 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PHOSPHO2Q8TCD6 241 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 MGARPQ8TDB4 240 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 DDI1Q8WTU0 396 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 ATXN2LQ8WWM7 1075 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 C19orf60Q96EN9 201 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 SEC16BQ96JE7 1060 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 BIRC8Q96P09 236 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 XPO6Q96QU8 1125 aaKnown RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 RANBP9Q96S59 729 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PNKPQ96T60 521 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 WACQ9BTA9 647 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 PI4K2AQ9BTU6 479 aa5.42□□□□□ -1.54
SNHG1-201ENST00000535076 CINPQ9BW66 212 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-201ENST00000535076 BCO2Q9BYV7 579 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms