RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PHBP35232 272 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 LIG4P49917 911 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 BNIP1Q12981 228 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 CALCOCO2Q13137 446 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 TTLL4Q14679 1199 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 NAB2Q15742 525 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 HSP90AA5PQ58FG0 334 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 OR52E8Q6IFG1 317 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 ALKBH5Q6P6C2 394 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 RBM44Q6ZP01 1051 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 KIAA0319LQ8IZA0 1049 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 NAT14Q8WUY8 206 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PBKQ96KB5 322 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SUN2Q9UH99 717 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 ANGPTL2Q9UKU9 493 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 LRRC42Q9Y546 428 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PPEF2O14830 753 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 USP1O94782 785 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 PIGRP01833 764 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 FGGP02679 453 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SLC10A3P09131 477 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 CXCL8P10145 99 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ESRRAP11474 423 aaPredicted RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SERPINB8P50452 374 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 KIZQ2M2Z5 673 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 C6orf118Q5T5N4 469 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ZNF280DQ6N043 979 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 RFWD3Q6PCD5 774 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 CCDC110Q8TBZ0 833 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 LPIN3Q9BQK8 851 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SMYD3Q9H7B4 428 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 AASDHPPTQ9NRN7 309 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 RAB20Q9NX57 234 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SLC45A1Q9Y2W3 748 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 NOC2LQ9Y3T9 749 aaKnown RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 MEIS3P2A8K0S8 358 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 H3BRB1 525 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 UNC5CO95185 931 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 RAP1GAPP47736 663 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 HPCAP84074 193 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 KIF22Q14807 665 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TMED2Q15363 201 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ZACNQ401N2 412 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 THNSL1Q8IYQ7 743 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 FAM71AQ8IYT1 594 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 DEPTORQ8TB45 409 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 LZICQ8WZA0 190 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 CCDC124Q96CT7 223 aaKnown RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ZNF184Q99676 751 aaPredicted RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SDCBP2Q9H190 292 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 FZD8Q9H461 694 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TUT1Q9H6E5 874 aaKnown RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 XAB2Q9HCS7 855 aaKnown RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ALG13Q9NP73 1137 aaKnown RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 UBN1Q9NPG3 1134 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 RBAKQ9NYW8 714 aaPredicted RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 CTNNAL1Q9UBT7 734 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SIX4Q9UIU6 781 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TRIM17Q9Y577 477 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 WASF2Q9Y6W5 498 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 CITO14578 2027 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 EXTL3O43909 919 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ASLP04424 464 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 NFICP08651 508 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TFPTP0C1Z6 253 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 GPC3P51654 580 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TAF1CQ15572 869 aaPredicted RBP9.42□□□□□ -0.9
SF3B2-216ENST00000534765 DUSP28Q4G0W2 176 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 FYB2Q5VWT5 728 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 RGMBQ6NW40 437 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 IYDQ6PHW0 289 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ANKS1BQ7Z6G8 1248 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 CCDC105Q8IYK2 499 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 USP38Q8NB14 1042 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TRIB2Q92519 343 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 SHC3Q92529 594 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ZNF333Q96JL9 665 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 EDEM3Q9BZQ6 932 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 ARHGEF3Q9NR81 526 aa9.42□□□□□ -0.9
SF3B2-216ENST00000534765 TREHO43280 583 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 ASMTLO95671 621 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 HLA-DRAP01903 254 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 GSTT2P0CG29 244 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 GSTT2BP0CG30 244 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 ARF4P18085 180 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 HOXA11P31270 313 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 NOP14P78316 857 aaKnown RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 PDE1BQ01064 536 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 CCDC142Q17RM4 750 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 HERPUD2Q9BSE4 406 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 TIPINQ9BVW5 301 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms