RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 A0A087X0B3 334 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 CDX4O14627 284 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 EIF3DO15371 548 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 STAU1O95793 577 aaKnown RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 F13A1P00488 732 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 CYP17A1P05093 508 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 PROS1P07225 676 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 PDGFRBP09619 1106 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 CEACAM1P13688 526 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 GBP1P32455 592 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 HOXD13P35453 343 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 GNL1P36915 607 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 PSMC1P62191 440 aaKnown RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 DHCR24Q15392 516 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 C2orf27AQ580R0 203 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 RHBDF2Q6PJF5 856 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 EPM2AIP1Q7L775 607 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 TRAPPC11Q7Z392 1133 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 DDX42Q86XP3 938 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 CBWD2Q8IUF1 395 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 ZNF507Q8TCN5 953 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 OVCA2Q8WZ82 227 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 OTUB2Q96DC9 234 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 PNKPQ96T60 521 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 TNMDQ9H2S6 317 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 CUEDC2Q9H467 287 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 KBTBD4Q9NVX7 518 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 HSPBP1Q9NZL4 362 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 WASF3Q9UPY6 502 aa12.29□□□□□ -0.44
CTNND1-238ENST00000534647 ZNF638Q14966 1978 aaKnown RBP12.29□□□□□ -0.44
CTNND1-238ENST00000534647 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 F8VP50 259 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 TNFRSF10BO14763 440 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 ALDH1A2O94788 518 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-238ENST00000534647 PTPN1P18031 435 aaKnown RBP12.28□□□□□ -0.44
CTNND1-238ENST00000534647 P2RY2P41231 377 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 GRIA2P42262 883 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 DPP6P42658 865 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 TNFRSF4P43489 277 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-238ENST00000534647 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 PSMD6Q15008 389 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 SNX30Q5VWJ9 437 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 TDRD10Q5VZ19 366 aaKnown RBP12.28□□□□□ -0.44
CTNND1-238ENST00000534647 LMBRD2Q68DH5 695 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-238ENST00000534647 ANO7Q6IWH7 933 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 PSAPL1Q6NUJ1 521 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 IL17RCQ8NAC3 791 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 MMS19Q96T76 1030 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 PANK2Q9BZ23 570 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 ELOVL4Q9GZR5 314 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 SNX25Q9H3E2 840 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 TMEM9BQ9NQ34 198 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 IL37Q9NZH6 218 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 ATG2BQ96BY7 2078 aa12.28□□□□□ -0.44
CTNND1-238ENST00000534647 ANAPC1Q9H1A4 1944 aa12.27□□□□□ -0.44
CTNND1-238ENST00000534647 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 TGFB1I1O43294 461 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 KAT7O95251 611 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 ADH1CP00326 375 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 ATICP31939 592 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 NOVA1P51513 510 aaKnown RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 IRX4P78413 519 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 AMPD3Q01432 767 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 TAF10Q12962 218 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 BYSLQ13895 437 aaKnown RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 SNRNP35Q16560 246 aaKnown RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 MDH1BQ5I0G3 518 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 EOGTQ5NDL2 527 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 CYP2U1Q7Z449 544 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 CCDC33Q8N5R6 958 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 KDF1Q8NAX2 398 aaPredicted RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 GLIS3Q8NEA6 775 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 NOC3LQ8WTT2 800 aaKnown RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 USP28Q96RU2 1077 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 MRPL45Q9BRJ2 306 aaKnown RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 TPSD1Q9BZJ3 242 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 ZSCAN16Q9H4T2 348 aaPredicted RBP12.27□□□□□ -0.45
CTNND1-238ENST00000534647 COMMD8Q9NX08 183 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 PCDHGC3Q9UN70 934 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 INVSQ9Y283 1065 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 NME7Q9Y5B8 376 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 CPQQ9Y646 472 aa12.27□□□□□ -0.45
CTNND1-238ENST00000534647 KIAA1549LQ6ZVL6 1849 aa12.26□□□□□ -0.45
CTNND1-238ENST00000534647 FAM92AA1XBS5 289 aa12.26□□□□□ -0.45
CTNND1-238ENST00000534647 RTN3O95197 1032 aaPredicted RBP12.26□□□□□ -0.45
CTNND1-238ENST00000534647 RECKO95980 971 aa12.26□□□□□ -0.45
CTNND1-238ENST00000534647 APODP05090 189 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms