RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	C10orf62	Q5T681	223 aa	Predicted RBP	5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	RNF220	Q5VTB9	566 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SULT6B1	Q6IMI4	303 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DARS2	Q6PI48	645 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	C11orf96	Q7Z7L8	435 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CLEC14A	Q86T13	490 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	TTC7B	Q86TV6	843 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	RHOT1	Q8IXI2	618 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DRC7	Q8IY82	874 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	LSM14A	Q8ND56	463 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	BORCS6	Q96GS4	357 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	MRGPRX4	Q96LA9	322 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	GLT1D1	Q96MS3	346 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	KMT5A	Q9NQR1	393 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	KLHL11	Q9NVR0	708 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FAM53C	Q9NYF3	392 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	POLK	Q9UBT6	870 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	APC2	O95996	2303 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ACACA	Q13085	2346 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PDZD2	O15018	2839 aa		5.36	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CACNA1I	Q9P0X4	2223 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ELP1	O95163	1332 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442		A0A088AWK7	358 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442		A0A0U1RQG5	324 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442		H3BNC9	293 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	GOLIM4	O00461	696 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CAPN9	O14815	690 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	TBC1D4	O60343	1298 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CSPG5	O95196	566 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DCN	P07585	359 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	HOXC6	P09630	235 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	IL12RB1	P42701	662 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	GJA9	P57773	515 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CNN3	Q15417	329 aa	Known RBP	5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	AASDH	Q4L235	1098 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	EPC2	Q52LR7	807 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PPP4R3A	Q6IN85	833 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FAM180A	Q6UWF9	173 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	TOGARAM2	Q6ZUX3	1019 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DAAM2	Q86T65	1068 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FNIP1	Q8TF40	1166 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	GJA10	Q969M2	543 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	IL17RA	Q96F46	866 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CLPTM1L	Q96KA5	538 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	NT5C1B	Q96P26	610 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	RAD9A	Q99638	391 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	APOL5	Q9BWW9	433 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ATP6V0A4	Q9HBG4	840 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FNIP2	Q9P278	1114 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	VWA7	Q9Y334	891 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DAAM1	Q9Y4D1	1078 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PMF1-BGLAP	U3KQ54	211 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ATR	Q13535	2644 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	MYO10	Q9HD67	2058 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SCN5A	Q14524	2016 aa		5.35	□□□□□ -1.55
ECHDC1-223	ENST00000534442	COL5A1	P20908	1838 aa	Predicted RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FN1	P02751	2386 aa	Known RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	COL6A6	A6NMZ7	2263 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	C2orf78	A6NCI8	922 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	LRRC10B	A6NIK2	292 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DDX3X	O00571	662 aa	Known RBP eCLIP	5.34	□□□□□ -1.55	7e-10	■■■□□ 16
ECHDC1-223	ENST00000534442	SLC16A6	O15403	523 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PHF2	O75151	1096 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ENDOD1	O94919	500 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	AMY1A	P04745	511 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	RPL13	P26373	211 aa	Known RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PEX2	P28328	305 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ECHS1	P30084	290 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SREBF1	P36956	1147 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	NKX6-1	P78426	367 aa	Predicted RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CDC42EP1	Q00587	391 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PCOLCE	Q15113	449 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	KCNA10	Q16322	511 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	THEMIS2	Q5TEJ8	643 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	WDR78	Q5VTH9	848 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	MAEA	Q7L5Y9	396 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SCYL3	Q8IZE3	742 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	KRT78	Q8N1N4	520 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SUSD6	Q92537	303 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	GFM2	Q969S9	779 aa	Known RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CDK5RAP3	Q96JB5	506 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SAMD11	Q96NU1	681 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PDCD2L	Q9BRP1	358 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ARMT1	Q9H993	441 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	TDP1	Q9NUW8	608 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ING3	Q9NXR8	418 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	TRPS1	Q9UHF7	1281 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PCDHA3	Q9Y5H8	950 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CENPE	Q02224	2701 aa		5.34	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SLC15A5	A6NIM6	579 aa		5.33	□□□□□ -1.56
ECHDC1-223	ENST00000534442	IFRD1	O00458	451 aa	Predicted RBP	5.33	□□□□□ -1.56
ECHDC1-223	ENST00000534442	DAPK3	O43293	454 aa		5.33	□□□□□ -1.56
ECHDC1-223	ENST00000534442	ADCY6	O43306	1168 aa		5.33	□□□□□ -1.56
ECHDC1-223	ENST00000534442	SLC28A2	O43868	658 aa		5.33	□□□□□ -1.56
ECHDC1-223	ENST00000534442	ALDH1A2	O94788	518 aa		5.33	□□□□□ -1.56

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