RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 GOLPH3LQ9H4A5 285 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.97e-6■■■■■ 74.5
COPB1-211ENST00000534234 SEMA4GQ9NTN9 838 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 COMMD8Q9NX08 183 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 IL37Q9NZH6 218 aa9.45□□□□□ -0.9
COPB1-211ENST00000534234 PATJQ8NI35 1801 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 COCHO43405 550 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 RPP40O75818 363 aaKnown RBP9.44□□□□□ -0.9
COPB1-211ENST00000534234 BEST1O76090 585 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CYP17A1P05093 508 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 TRIM49P0CI25 452 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 TRIM49CP0CI26 452 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CCDC192P0DO97 292 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 TRIM21P19474 475 aaKnown RBP9.44□□□□□ -0.9
COPB1-211ENST00000534234 ASPAP45381 313 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 ATXN1P54253 815 aaKnown RBP9.44□□□□□ -0.9
COPB1-211ENST00000534234 MAP3K7CLP57077 242 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 PPP3CAQ08209 521 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 DMC1Q14565 340 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 DHCR24Q15392 516 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CSRP2Q16527 193 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 C2orf27AQ580R0 203 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 SNX30Q5VWJ9 437 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 RHBDF2Q6PJF5 856 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 DDX42Q86XP3 938 aaKnown RBP eCLIP9.44□□□□□ -0.92e-15■■■■■ 26.8
COPB1-211ENST00000534234 FAM186BQ8IYM0 893 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CCDC34Q96HJ3 373 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 SMOQ99835 787 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CCSER2Q9H7U1 834 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 MMRN2Q9H8L6 949 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CSNK1G1Q9HCP0 422 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 KRT82Q9NSB4 513 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 FAM49BQ9NUQ9 324 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 TBC1D14Q9P2M4 693 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 HMGXB4Q9UGU5 601 aa9.44□□□□□ -0.9
COPB1-211ENST00000534234 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
COPB1-211ENST00000534234 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.44□□□□□ -0.9
COPB1-211ENST00000534234 E2F8A0AVK6 867 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 MED19A0JLT2 244 aaPredicted RBP9.43□□□□□ -0.9
COPB1-211ENST00000534234 FAM92AA1XBS5 289 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 K7EQS6 105 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 AXIN1O15169 862 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 ZDHHC11BP0C7U3 371 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 ADORA2BP29275 332 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 SLC6A11P48066 632 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 GAB4Q2WGN9 574 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 KBTBD6Q86V97 674 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 CCDC150Q8NCX0 1101 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 USP33Q8TEY7 942 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 ACDQ96AP0 544 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 CYFIP2Q96F07 1278 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 EEF2KMTQ96G04 330 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 PNKPQ96T60 521 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 HNRNPABQ99729 332 aaKnown RBP9.43□□□□□ -0.9
COPB1-211ENST00000534234 NT5C1AQ9BXI3 368 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 FBXO44Q9H4M3 255 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 CYP3A43Q9HB55 503 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 APOBEC3GQ9HC16 384 aaKnown RBP9.43□□□□□ -0.9
COPB1-211ENST00000534234 GMIPQ9P107 970 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 TCHHQ07283 1943 aa9.43□□□□□ -0.9
COPB1-211ENST00000534234 NUP210Q8TEM1 1887 aaPredicted RBP9.42□□□□□ -0.9
COPB1-211ENST00000534234 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.42□□□□□ -0.9
COPB1-211ENST00000534234 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 GOLGA6L4A6NEF3 574 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 ANTXRLA6NF34 631 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 APBB3O95704 486 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 ADH1CP00326 375 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 FAM200BP0CF97 657 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 CD58P19256 250 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 PGFP49763 221 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 TUBP50607 506 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 SEC13P55735 322 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 ENPEPQ07075 957 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 INCA1Q0VD86 236 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 PNOCQ13519 176 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 EDRF1Q3B7T1 1238 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 ZCWPW2Q504Y3 356 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 LY6G5CQ5SRR4 150 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 KRT39Q6A163 491 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 PRR23CQ6ZRP0 262 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
COPB1-211ENST00000534234 OTUB2Q96DC9 234 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 LOXL4Q96JB6 756 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 ZFRQ96KR1 1074 aaKnown RBP9.42□□□□□ -0.9
COPB1-211ENST00000534234 RTKNQ9BST9 563 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 NACA2Q9H009 215 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 ARRDC1-AS1Q9H2J1 176 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 TMEM8AQ9HCN3 771 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 TLR8Q9NR97 1041 aaKnown RBP9.42□□□□□ -0.9
COPB1-211ENST00000534234 EBF1Q9UH73 591 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 SH3BP1Q9Y3L3 701 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 FRYLO94915 3013 aa9.42□□□□□ -0.9
COPB1-211ENST00000534234 A0A0A0MRY4 1105 aa9.41□□□□□ -0.9
COPB1-211ENST00000534234 CETN3O15182 167 aa9.41□□□□□ -0.9
COPB1-211ENST00000534234 GDF9O60383 454 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms