RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 CPNE5Q9HCH3 593 aa12.91□□□□□ -0.34
KNL1-212ENST00000534204 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
KNL1-212ENST00000534204 CPQQ9Y646 472 aa12.91□□□□□ -0.34
KNL1-212ENST00000534204 ARID1BQ8NFD5 2236 aaPredicted RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 METTL12A8MUP2 240 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 MEI4A8MW99 385 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 PRRT4C9JH25 899 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 HOXC11O43248 304 aaPredicted RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 PAPSS1O43252 624 aaPredicted RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 TRAK2O60296 914 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 PCDHGA12O60330 932 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 NDUFS2O75306 463 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 ADH1CP00326 375 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 NTRK1P04629 796 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 PFKLP17858 780 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 CDC25AP30304 524 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 KRT2P35908 639 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 GRK6P43250 576 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 TARDBPQ13148 414 aaKnown RBP eCLIP12.9□□□□□ -0.348e-11■■■■■ 35.9
KNL1-212ENST00000534204 PDIA5Q14554 519 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 NFE2Q16621 373 aaPredicted RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 INTS6LQ5JSJ4 861 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 DCAF12L1Q5VU92 463 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 FBXL19Q6PCT2 694 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 C1orf186Q6ZWK4 172 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 TRMT11Q7Z4G4 463 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 THEM5Q8N1Q8 247 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 CADM4Q8NFZ8 388 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 SNRNP27Q8WVK2 155 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 WBP2Q969T9 261 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 TMEM176AQ96HP8 235 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 TSPAN18Q96SJ8 248 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 TRIM9Q9C026 710 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 TRIM4Q9C037 500 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 MIR1-1HGQ9H1L0 117 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 CPSF3Q9UKF6 684 aaKnown RBP12.9□□□□□ -0.34
KNL1-212ENST00000534204 PCDHGA1Q9Y5H4 931 aa12.9□□□□□ -0.34
KNL1-212ENST00000534204 TBC1D3BA6NDS4 549 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 ZNF840PA6NDX5 716 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 WASH3PC4AMC7 463 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 E9PMD0 336 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 KCNK3O14649 394 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 TERTO14746 1132 aaKnown RBP12.89□□□□□ -0.35
KNL1-212ENST00000534204 XPOTO43592 962 aaKnown RBP12.89□□□□□ -0.35
KNL1-212ENST00000534204 ACAT1P24752 427 aaKnown RBP12.89□□□□□ -0.35
KNL1-212ENST00000534204 CSNK1EP49674 416 aaKnown RBP12.89□□□□□ -0.35
KNL1-212ENST00000534204 TAF6P49848 677 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 CFAP221Q4G0U5 840 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 HES3Q5TGS1 186 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
KNL1-212ENST00000534204 RINT1Q6NUQ1 792 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 SLC39A4Q6P5W5 647 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 LAYNQ6UX15 382 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 KCNN1Q92952 543 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 MED8Q96G25 268 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 MKRN2Q9H000 416 aaKnown RBP12.89□□□□□ -0.35
KNL1-212ENST00000534204 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 GTF3C4Q9UKN8 822 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 KIAA1024Q9UPX6 916 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
KNL1-212ENST00000534204 H0Y8X5 98 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 SLC9A3R1O14745 358 aaPredicted RBP12.88□□□□□ -0.35
KNL1-212ENST00000534204 IGLV3-19P01714 112 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 JUPP14923 745 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 MCM7P33993 719 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 ACADVLP49748 655 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 PREPLQ4J6C6 727 aaPredicted RBP12.88□□□□□ -0.35
KNL1-212ENST00000534204 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 C17orf75Q9HAS0 396 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 ITM2CQ9NQX7 267 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
KNL1-212ENST00000534204 L1RE1Q9UN81 338 aa12.88□□□□□ -0.35
KNL1-212ENST00000534204 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
KNL1-212ENST00000534204 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
KNL1-212ENST00000534204 OGTO15294 1046 aa12.87□□□□□ -0.35
KNL1-212ENST00000534204 HNF1BP35680 557 aa12.87□□□□□ -0.35
KNL1-212ENST00000534204 TSPY1Q01534 308 aa12.87□□□□□ -0.35
KNL1-212ENST00000534204 GAD2Q05329 585 aa12.87□□□□□ -0.35
KNL1-212ENST00000534204 TMEM132DQ14C87 1099 aa12.87□□□□□ -0.35
KNL1-212ENST00000534204 FUT11Q495W5 492 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms