RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 SCML2Q9UQR0 700 aa16.34■□□□□ 0.21
UBXN1-217ENST00000534176 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBXN1-217ENST00000534176 TRDMT1O14717 391 aaKnown RBP16.33■□□□□ 0.2
UBXN1-217ENST00000534176 ATG13O75143 517 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 ZDHHC11BP0C7U3 371 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 DRD1P21728 446 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 GCNT1Q02742 428 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 CLEC20AQ6ZU45 233 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 FAM114A1Q8IWE2 563 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 TRIM59Q8IWR1 403 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 SPEM1Q8N4L4 309 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 WHAMMQ8TF30 809 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-217ENST00000534176 ZFYVE19Q96K21 471 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 CYP2S1Q96SQ9 504 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 TMEM30AQ9NV96 361 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 HESX1Q9UBX0 185 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 HMGXB4Q9UGU5 601 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 MTF2Q9Y483 593 aaPredicted RBP16.33■□□□□ 0.2
UBXN1-217ENST00000534176 PCDHGA2Q9Y5H1 932 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 ANAPC1Q9H1A4 1944 aa16.33■□□□□ 0.2
UBXN1-217ENST00000534176 E2F8A0AVK6 867 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 SHISA7A6NL88 538 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 LEFTY2O00292 366 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 PAPSS2O95340 614 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-217ENST00000534176 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
UBXN1-217ENST00000534176 PAEPP09466 180 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 MBL2P11226 248 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-217ENST00000534176 CHRNB1P11230 501 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 ADORA2BP29275 332 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 IFRD2Q12894 506 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-217ENST00000534176 FZD5Q13467 585 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 CAMK4Q16566 473 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 ENOSF1Q7L5Y1 443 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 ANKRD52Q8NB46 1076 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 TWNKQ96RR1 684 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 SRRTQ9BXP5 876 aaKnown RBP16.32■□□□□ 0.2
UBXN1-217ENST00000534176 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 EBF3Q9H4W6 596 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 ECT2Q9H8V3 914 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
UBXN1-217ENST00000534176 PRMT8Q9NR22 394 aaPredicted RBP16.32■□□□□ 0.2
UBXN1-217ENST00000534176 SP9P0CG40 484 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 VDRP11473 427 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 ERCC5P28715 1186 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 ATP5C1P36542 298 aaKnown RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 EIF2DP41214 584 aaKnown RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 BCAT1P54687 386 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 RAD23BP54727 409 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 KCNH2Q12809 1159 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 CCINQ13939 588 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 TPD52L1Q16890 204 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 EML3Q32P44 896 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 TMEM196Q5HYL7 178 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 PPP1R26Q5T8A7 1209 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 ALYREFQ86V81 257 aaKnown RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 SLC4A11Q8NBS3 891 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 ZMIZ2Q8NF64 920 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 SCAMP5Q8TAC9 235 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 HPS4Q9NQG7 708 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 CLIC5Q9NZA1 410 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 CPQQ9Y646 472 aa16.31■□□□□ 0.2
UBXN1-217ENST00000534176 HELZP42694 1942 aaKnown RBP16.31■□□□□ 0.2
UBXN1-217ENST00000534176 TLR5O60602 858 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 ADH1CP00326 375 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 SETSIPP0DME0 302 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 RALAP11233 206 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
UBXN1-217ENST00000534176 CXCL12P48061 93 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 KIF11P52732 1056 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 TNK2Q07912 1038 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 MTAPQ13126 283 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 ORC1Q13415 861 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 ZNF394Q53GI3 561 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 NUDT18Q6ZVK8 323 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 GPIHBP1Q8IV16 184 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 PPM1KQ8N3J5 372 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 TATDN2Q93075 761 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 P2RY13Q9BPV8 354 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 RNF38Q9H0F5 515 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.22e-8■■■■■ 37.3
UBXN1-217ENST00000534176 ZSCAN32Q9NX65 697 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
UBXN1-217ENST00000534176 LSM7Q9UK45 103 aaKnown RBP16.3■□□□□ 0.2
UBXN1-217ENST00000534176 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 USP3Q9Y6I4 520 aa16.3■□□□□ 0.2
UBXN1-217ENST00000534176 PATJQ8NI35 1801 aa16.29■□□□□ 0.2
UBXN1-217ENST00000534176 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
UBXN1-217ENST00000534176 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
UBXN1-217ENST00000534176 HHLA1C9JL84 531 aa16.29■□□□□ 0.2
UBXN1-217ENST00000534176 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
UBXN1-217ENST00000534176 COCHO43405 550 aa16.29■□□□□ 0.2
UBXN1-217ENST00000534176 GFRA3O60609 400 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms