RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 MTMR12Q9C0I1 747 aa15.27■□□□□ 0.04
SHARPIN-208ENST00000533948 PCIF1Q9H4Z3 704 aa15.27■□□□□ 0.04
SHARPIN-208ENST00000533948 MBD1Q9UIS9 605 aaPredicted RBP15.27■□□□□ 0.04
SHARPIN-208ENST00000533948 SIX4Q9UIU6 781 aa15.27■□□□□ 0.04
SHARPIN-208ENST00000533948 FREM2Q5SZK8 3169 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 ANKRD11Q6UB99 2663 aaPredicted RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 ADAMTS9Q9P2N4 1935 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 TRIM66O15016 1216 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 KLF8O95600 359 aaPredicted RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 TNNC2P02585 160 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 PDGFRBP09619 1106 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 CHRM1P11229 460 aaPredicted RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 ENGP17813 658 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 EIF2DP41214 584 aaKnown RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 GRIA2P42262 883 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 SLC6A11P48066 632 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 ATXN3P54252 364 aaPredicted RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 PSMC1P62191 440 aaKnown RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 SLC7A9P82251 487 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 SURF1Q15526 300 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 TDRD10Q5VZ19 366 aaKnown RBP15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 CNNM4Q6P4Q7 775 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 GPD1LQ8N335 351 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 MYLPFQ96A32 169 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 MMS19Q96T76 1030 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 C7orf25Q9BPX7 421 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 INTS13Q9NVM9 706 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 RCOR1Q9UKL0 485 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 CFAP45Q9UL16 551 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 NEUROG3Q9Y4Z2 214 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 CPQQ9Y646 472 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 MYOFQ9NZM1 2061 aa15.26■□□□□ 0.03
SHARPIN-208ENST00000533948 A0A0A0MRY4 1105 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 ZNF233A6NK53 670 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 SGK1O00141 431 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 ZBTB24O43167 697 aaPredicted RBP15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 KAT7O95251 611 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 ADH1CP00326 375 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 CYP17A1P05093 508 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 CASP1P29466 404 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 HOXD13P35453 343 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 GNL1P36915 607 aaPredicted RBP15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 P2RY2P41231 377 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 TNFRSF4P43489 277 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 USP46P62068 366 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 FAM193AP78312 1265 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 SIM1P81133 766 aaPredicted RBP15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 PREPLQ4J6C6 727 aaPredicted RBP15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 EMC10Q5UCC4 262 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 RESP18Q5W5W9 173 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 RHBDF2Q6PJF5 856 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 NUDT18Q6ZVK8 323 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 HS2ST1Q7LGA3 356 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 C12orf40Q86WS4 652 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 DDX42Q86XP3 938 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 IL17RCQ8NAC3 791 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 MYCBPAPQ8TBZ2 947 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 C8orf48Q96LL4 319 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 TTLL2Q9BWV7 592 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 RNF38Q9H0F5 515 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 SNX25Q9H3E2 840 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 CRTAC1Q9NQ79 661 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 SMPD4Q9NXE4 827 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 FAM13BQ9NYF5 915 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 TBC1D14Q9P2M4 693 aa15.25■□□□□ 0.03
SHARPIN-208ENST00000533948 TAF4O00268 1085 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 WARSP23381 471 aaKnown RBP15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 NOP14P78316 857 aaKnown RBP15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 LYSMD4Q5XG99 296 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 LIMS2Q7Z4I7 341 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 PIP4P1Q86T03 277 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 DEFB119Q8N690 84 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 CEP76Q8TAP6 659 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 KBTBD7Q8WVZ9 684 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 HMGB4Q8WW32 186 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 PCED1BQ96HM7 432 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 MAGEF1Q9HAY2 307 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 ARHGEF4Q9NR80 690 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 CFAP97Q9P2B7 532 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 MSRB2Q9Y3D2 182 aa15.24■□□□□ 0.03
SHARPIN-208ENST00000533948 LAMA5O15230 3695 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 NBEAQ8NFP9 2946 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 TBC1D3BA6NDS4 549 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 F8VP50 259 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 EIF3DO15371 548 aaKnown RBP eCLIP15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 AP5Z1O43299 807 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 CFIP05156 583 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 MBL2P11226 248 aaPredicted RBP15.23■□□□□ 0.03
SHARPIN-208ENST00000533948 ITPKAP23677 461 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms