RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PCGF5Q86SE9 256 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 CDHR1Q96JP9 859 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 LSM8O95777 96 aaKnown RBP20.16■□□□□ 0.82
CAPN1-226ENST00000533820 RCN2Q14257 317 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 SGSM1Q2NKQ1 1148 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 RNF220Q5VTB9 566 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 XRRA1Q6P2D8 792 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 SCYL2Q6P3W7 929 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 C4orf50Q6ZRC1 276 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 UBR7Q8N806 425 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 WDR60Q8WVS4 1066 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 TWNKQ96RR1 684 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 CYTH2Q99418 400 aa20.16■□□□□ 0.82
CAPN1-226ENST00000533820 IQCGQ9H095 443 aaKnown RBP20.16■□□□□ 0.82
CAPN1-226ENST00000533820 MAFBQ9Y5Q3 323 aaPredicted RBP20.16■□□□□ 0.82
CAPN1-226ENST00000533820 UGT1A9O60656 530 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 KRT7P08729 469 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 ASPAP45381 313 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 SLC18A1P54219 525 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 CDH6P55285 790 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 C15orf59Q2T9L4 293 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-226ENST00000533820 CIAPIN1Q6FI81 312 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 WDR49Q8IV35 697 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 ZNF280CQ8ND82 737 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 FAF2Q96CS3 445 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 UGT1A7Q9HAW7 530 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 UGT1A10Q9HAW8 530 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 UGT1A8Q9HAW9 530 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 RAB6BQ9NRW1 208 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.15■□□□□ 0.82
CAPN1-226ENST00000533820 GJA3Q9Y6H8 435 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 TRIM49D1C9J1S8 452 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 INO80B-WBP1J3KQ70 363 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 CYB561D2O14569 222 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 ESRRAP11474 423 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-226ENST00000533820 ZNF200P98182 395 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-226ENST00000533820 STXBP2Q15833 593 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 REPS2Q8NFH8 660 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 DNAJC9Q8WXX5 260 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 PCYT2Q99447 389 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 TEX13BQ9BXU2 312 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 INO80BQ9C086 356 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-226ENST00000533820 AFG3L2Q9Y4W6 797 aa20.15■□□□□ 0.82
CAPN1-226ENST00000533820 EIF4BP23588 611 aaKnown RBP20.14■□□□□ 0.82
CAPN1-226ENST00000533820 ACSBG2Q5FVE4 666 aa20.14■□□□□ 0.82
CAPN1-226ENST00000533820 FAM102AQ5T9C2 384 aaPredicted RBP20.14■□□□□ 0.82
CAPN1-226ENST00000533820 SYT15Q9BQS2 421 aa20.14■□□□□ 0.82
CAPN1-226ENST00000533820 HACL1Q9UJ83 578 aa20.14■□□□□ 0.82
CAPN1-226ENST00000533820 SIGLEC16A6NMB1 481 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 CCDC22O60826 627 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 TOM1L1O75674 476 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 TOP3BO95985 862 aaKnown RBP20.14■□□□□ 0.81
CAPN1-226ENST00000533820 CXCL8P10145 99 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 STAT5BP51692 787 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 FBXO27Q8NI29 283 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 PIWIL1Q96J94 861 aaKnown RBP20.14■□□□□ 0.81
CAPN1-226ENST00000533820 BTBD10Q9BSF8 475 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 NMUR2Q9GZQ4 415 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 SMYD3Q9H7B4 428 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 KCNK13Q9HB14 408 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 USP18Q9UMW8 372 aa20.14■□□□□ 0.81
CAPN1-226ENST00000533820 CXorf49A8MYA2 514 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 GSC2O15499 205 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 MSCO60682 206 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 PIGRP01833 764 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 PRKCBP05771 671 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 UBA1P22314 1058 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 POLR2BP30876 1174 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 MYBPC3Q14896 1274 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 EEF1DP3Q658K8 133 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 UCMAQ8WVF2 138 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 NSL1Q96IY1 281 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 PEBP4Q96S96 227 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 MRPL4Q9BYD3 311 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 NMRK1Q9NWW6 199 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 WDR35Q9P2L0 1181 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 CAPN9O14815 690 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 LUC7L3O95232 432 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 ENO1P06733 434 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 PPP1R12CQ9BZL4 782 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 VPS11Q9H270 941 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 TAS2R1Q9NYW7 299 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 LRRC42Q9Y546 428 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 M0QYV0 167 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 LIN7AO14910 233 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 YWHAEP62258 255 aaKnown RBP20.13■□□□□ 0.81
CAPN1-226ENST00000533820 ROR1Q01973 937 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 LY6KQ17RY6 165 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 ACAP3Q96P50 834 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 SDCBP2Q9H190 292 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 XYLT2Q9H1B5 865 aa20.13■□□□□ 0.81
CAPN1-226ENST00000533820 IQANK1A0A1B0GTG1 560 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 FCHO1O14526 889 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 COPEO14579 308 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms