RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ADAM2Q99965 735 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CLPBQ9H078 707 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 NPHS2Q9NP85 383 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 GPRC5DQ9NZD1 345 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 HSPA1AP0DMV8 641 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 HSPA1BP0DMV9 641 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ERVK-10P10266 1014 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 DARSP14868 501 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 AXLP30530 894 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 SCNN1BP51168 640 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CCL23P55773 120 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 GUCY1A3Q02108 690 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 PPIL2Q13356 520 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 AGAP9Q5VTM2 703 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ERLEC1Q96DZ1 483 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ZFP42Q96MM3 310 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CELF4Q9BZC1 486 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 PDGFDQ9GZP0 370 aaPredicted RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 KCTD10Q9H3F6 313 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 SMARCAL1Q9NZC9 954 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 LNPEPQ9UIQ6 1025 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CDY2AQ9Y6F7 541 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CDY1Q9Y6F8 540 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 DIP2BQ9P265 1576 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 MYO1GB0I1T2 1018 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 CRTAMO95727 393 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 LSM8O95777 96 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 PGK1P00558 417 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 VIL1P09327 827 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 PTPRAP18433 802 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 FNTAP49354 379 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 GEMIN4P57678 1058 aaKnown RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 PRAMEF19Q5SWL8 479 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ZNF410Q86VK4 478 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 PALB2Q86YC2 1186 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 TPCN2Q8NHX9 752 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 SKA1Q96BD8 255 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ZFYVE19Q96K21 471 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ROPN1BQ9BZX4 212 aaPredicted RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 ROPN1Q9HAT0 212 aaPredicted RBP6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 MAP10Q9P2G4 905 aa6.61□□□□□ -1.35
UBQLN1-206ENST00000533705 DYRK3O43781 588 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TRIM16O95361 564 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 APOA4P06727 396 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CHN1P15882 459 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 HDAC4P56524 1084 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 FKBP1AP62942 108 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 SKOR1P84550 965 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CCZ1BP86790 482 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CCZ1P86791 482 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 DAB2P98082 770 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 MYBPC2Q14324 1141 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TJAP1Q5JTD0 557 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 SV2AQ7L0J3 742 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RIBC1Q8N443 379 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM136AQ96C01 138 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ADGRE3Q9BY15 652 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NT5MQ9NPB1 228 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PDGFCQ9NRA1 345 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 KBTBD4Q9NVX7 518 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 GID8Q9NWU2 228 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 AK9Q5TCS8 1911 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 BCORL1Q5H9F3 1711 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TRIM49D1C9J1S8 452 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ANKRD65E5RJM6 399 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CABYRO75952 493 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 KLHL2O95198 593 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 JCHAINP01591 159 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CCR1P32246 355 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 GRK3P35626 688 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CDC16Q13042 620 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 TFDP3Q5H9I0 405 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 IRAK1BP1Q5VVH5 260 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 DENND1BQ6P3S1 775 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RGL4Q8IZJ4 473 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 MYO1HQ8N1T3 1032 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 RXFP2Q8WXD0 754 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM162AQ96A26 154 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CCDC3Q9BQI4 270 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 HTATIP2Q9BUP3 242 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 ASB7Q9H672 318 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 DDX4Q9NQI0 724 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 BARX2Q9UMQ3 279 aaPredicted RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PLAGL2Q9UPG8 496 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CFAP73A6NFT4 308 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 IRF6O14896 467 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PJA2O43164 708 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 FGFR1P11362 822 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 GZMAP12544 262 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NCKAP1LP55160 1127 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 DNAL1Q4LDG9 190 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 APOBEC3HQ6NTF7 200 aaKnown RBP6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 NIPA1Q7RTP0 329 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 C10orf53Q8N6V4 93 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 CATSPER1Q8NEC5 780 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 E2F7Q96AV8 911 aa6.6□□□□□ -1.35
UBQLN1-206ENST00000533705 PHF21AQ96BD5 680 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms