RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CALM1P0DP23 149 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CALM2P0DP24 149 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CALM3P0DP25 149 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 MTHFD1P11586 935 aaKnown RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 PTPN1P18031 435 aaKnown RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 POLR2CP19387 275 aaPredicted RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 NFKBIAP25963 317 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CRABP2P29373 138 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 IFNAR2P48551 515 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 HSPA13P48723 471 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 NR2C2P49116 596 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 EPHA5P54756 1037 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ELF3P78545 371 aaPredicted RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 HPCAP84074 193 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 GBE1Q04446 702 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 MYO1EQ12965 1108 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ADAM9Q13443 819 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CUL4AQ13619 759 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ANKRD1Q15327 319 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 SUPT20HL1Q3ZLR7 823 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 FUT11Q495W5 492 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CDONQ4KMG0 1287 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ALFQ53S48 1182 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ODF2Q5BJF6 829 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 SPECC1LQ69YQ0 1117 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 OR52E8Q6IFG1 317 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 FAM122CQ6P4D5 195 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CCDC129Q6ZRS4 1044 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 UBE2R2Q712K3 238 aaPredicted RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 ITIH5Q86UX2 942 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 FAM124AQ86V42 546 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CHD1LQ86WJ1 897 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 TMEFF1Q8IYR6 380 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ARFGAP2Q8N6H7 521 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ZNF713Q8N859 430 aaPredicted RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 RASSF5Q8WWW0 418 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ZNF606Q8WXB4 792 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 SH3KBP1Q96B97 665 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CLIC6Q96NY7 704 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 NOX5Q96PH1 765 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 TSG101Q99816 390 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 DHRS9Q9BPW9 319 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 IMPG2Q9BZV3 1241 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 B3GNT4Q9C0J1 378 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.8□□□□□ -1.48
CD44-236ENST00000533222 CARD9Q9H257 536 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CLSTN2Q9H4D0 955 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CAAP1Q9H8G2 361 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 DBNDD1Q9H9R9 158 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 TRPC7Q9HCX4 862 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 AASDHPPTQ9NRN7 309 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 RIC8BQ9NVN3 520 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 THAP1Q9NVV9 213 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 DTLQ9NZJ0 730 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 BTBD7Q9P203 1132 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ASIC3Q9UHC3 531 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 HDAC9Q9UKV0 1011 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 AGAP1Q9UPQ3 857 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ATP23Q9Y6H3 246 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 KDM6AO15550 1401 aaPredicted RBP5.8□□□□□ -1.48
CD44-236ENST00000533222 MROH7Q68CQ1 1323 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 NPHP3Q7Z494 1330 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 WDR33Q9C0J8 1336 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 SNAPC4Q5SXM2 1469 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 A0A0J9YVX5 310 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SLC12A8A0AV02 714 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CCDC169A6NNP5 214 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 GOLGA8BA8MQT2 603 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 MIF4GDA9UHW6 222 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 HIP1O00291 1037 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 APOL1O14791 398 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 FYB1O15117 783 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ALOX15BO15296 676 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 NCAM2O15394 837 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PAX4O43316 350 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PEX1O43933 1283 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 MAFKO60675 156 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 MAFO75444 373 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 SUPT3HO75486 399 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 TSPAN9O75954 239 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SYF2O95926 243 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 ZBED1O96006 694 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 C4BPAP04003 597 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 ITGA2BP08514 1039 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 MYL3P08590 195 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 C1QTNF9P0C862 333 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PIM1P11309 404 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 CDK4P11802 303 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 POU3F3P20264 500 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 SP100P23497 879 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 ANXA13P27216 316 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 LSP1P33241 339 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 NUDT1P36639 197 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 RGS2P41220 211 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 UBA7P41226 1012 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ABCG1P45844 678 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ETV1P50549 477 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SRP54P61011 504 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 ATP8B2P98198 1209 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms