RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 IMPG2Q9BZV3 1241 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 DUSP15Q9H1R2 295 aaPredicted RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 TMEM8AQ9HCN3 771 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 CRTAC1Q9NQ79 661 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 MAGEC2Q9UBF1 373 aaPredicted RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 LAMA1P25391 3075 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 BICDL2A1A5D9 508 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 A8MXQ7 604 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 BIN1O00499 593 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 CDX4O14627 284 aaPredicted RBP10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 GJA1P17302 382 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 PTPN1P18031 435 aaKnown RBP10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 GABRR2P28476 465 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 CTHP32929 405 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 MAGEA11P43364 429 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 CDH8P55286 799 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 TEAD2Q15562 447 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 CCDC142Q17RM4 750 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 ZNF423Q2M1K9 1284 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 KRT39Q6A163 491 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 TCEAL6Q6IPX3 200 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 POTEHQ6S545 545 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 VSTM1Q6UX27 236 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 CCDC150Q8NCX0 1101 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 DEFB124Q8NES8 71 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 SHKBP1Q8TBC3 707 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 TAS1R2Q8TE23 839 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 TCEAL3Q969E4 200 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 MYLPFQ96A32 169 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 PCED1BQ96HM7 432 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 ATXN3LQ9H3M9 355 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 SMYD3Q9H7B4 428 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 MMRN2Q9H8L6 949 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 EBF1Q9UH73 591 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 KLK13Q9UKR3 277 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 NME7Q9Y5B8 376 aa10.83□□□□□ -0.68
CHMP4A-206ENST00000533011 LOC400499M0QZD8 3231 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 HEPACAM2A8MVW5 462 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CSH1P0DML2 217 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CSH2P0DML3 217 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CDC25CP30307 473 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 DPP6P42658 865 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 MXI1P50539 228 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 AMPD2Q01433 879 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CYP27A1Q02318 531 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 DDR2Q16832 855 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 ARHGAP15Q53QZ3 475 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 MDH1BQ5I0G3 518 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 KLHL10Q6JEL2 608 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 TTI2Q6NXR4 508 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 SCARA5Q6ZMJ2 495 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 GAREM2Q75VX8 874 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 FILIP1Q7Z7B0 1213 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 SCN4BQ8IWT1 228 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 B3GALNT2Q8NCR0 500 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 LSM14AQ8ND56 463 aaKnown RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 FBXL13Q8NEE6 735 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 NELFBQ8WX92 580 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 EXOC4Q96A65 974 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 ELMO3Q96BJ8 720 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 TNIP3Q96KP6 325 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CEP295NLQ96MC4 621 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 ZSWIM3Q96MP5 696 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CEP63Q96MT8 703 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 GCNAQ96QF7 691 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 SDCBP2Q9H190 292 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 SLITRK6Q9H5Y7 841 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 CCDC86Q9H6F5 360 aaKnown RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 IL21Q9HBE4 155 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 METTL14Q9HCE5 456 aaKnown RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 OBP2AQ9NY56 170 aa10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 ARMCX3Q9UH62 379 aaPredicted RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 EVLQ9UI08 416 aaPredicted RBP10.82□□□□□ -0.68
CHMP4A-206ENST00000533011 PCNX2A6NKB5 2137 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 CAPN8A6NHC0 703 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 SLC38A8A6NNN8 435 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 NOL4O94818 638 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 HMGA1P17096 107 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 BDNFP23560 247 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 GRIK1P39086 918 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 VIPR2P41587 438 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 ASPAP45381 313 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 GPR15P49685 360 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 NLRP12P59046 1061 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 NOP14P78316 857 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 SIM1P81133 766 aaPredicted RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 SCAPQ12770 1279 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 GRSF1Q12849 480 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 PAK1Q13153 545 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 PON2Q15165 354 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms