RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 HPS4Q9NQG7 708 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 DUS2Q9NX74 493 aaKnown RBP24.28■■□□□ 1.48
CAPN1-222ENST00000532285 GMIPQ9P107 970 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 GOLGA6L22H0YM25 854 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 TUBP50607 506 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 ARHGAP17Q68EM7 881 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 UBR7Q8N806 425 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 KIAA1958Q8N8K9 716 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 TLR8Q9NR97 1041 aaKnown RBP24.27■■□□□ 1.48
CAPN1-222ENST00000532285 SPATA6Q9NWH7 488 aaPredicted RBP24.27■■□□□ 1.48
CAPN1-222ENST00000532285 DACH1Q9UI36 760 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 SCML2Q9UQR0 700 aa24.27■■□□□ 1.48
CAPN1-222ENST00000532285 LEFTY2O00292 366 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 ARSAP15289 507 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 ACO1P21399 889 aaKnown RBP24.26■■□□□ 1.47
CAPN1-222ENST00000532285 IFNAR2P48551 515 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 ZXDBP98169 803 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 AMPD2Q01433 879 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 TPD52L1Q16890 204 aaPredicted RBP24.26■■□□□ 1.47
CAPN1-222ENST00000532285 GPRIN1Q7Z2K8 1008 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 DDX42Q86XP3 938 aaKnown RBP eCLIP24.26■■□□□ 1.47
CAPN1-222ENST00000532285 CREBRFQ8IUR6 639 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 PPM1KQ8N3J5 372 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 ATP2A3Q93084 1043 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 JAKMIP2Q96AA8 810 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 CNOT6LQ96LI5 555 aaKnown RBP24.26■■□□□ 1.47
CAPN1-222ENST00000532285 UBXN6Q9BZV1 441 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 LMAN1LQ9HAT1 526 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 FAM86C1Q9NVL1 165 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 KIAA1257Q9ULG3 409 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 CPQQ9Y646 472 aa24.26■■□□□ 1.47
CAPN1-222ENST00000532285 COCHO43405 550 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 MBL2P11226 248 aaPredicted RBP24.25■■□□□ 1.47
CAPN1-222ENST00000532285 SLC8A3P57103 927 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 DPCR1Q3MIW9 517 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 SGO2Q562F6 1265 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 TXNDC11Q6PKC3 985 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 CPA6Q8N4T0 437 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 ANKRD52Q8NB46 1076 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 IER2Q9BTL4 223 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 SMPD4Q9NXE4 827 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 WNT6Q9Y6F9 365 aa24.25■■□□□ 1.47
CAPN1-222ENST00000532285 OTOL1A6NHN0 477 aaPredicted RBP24.24■■□□□ 1.47
CAPN1-222ENST00000532285 LAMTOR5O43504 91 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 CHRNB1P11230 501 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 ERCC5P28715 1186 aaPredicted RBP24.24■■□□□ 1.47
CAPN1-222ENST00000532285 KIF11P52732 1056 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 GCNT1Q02742 428 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 LRRC32Q14392 662 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 PON2Q15165 354 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 EML3Q32P44 896 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 PHOX2BQ99453 314 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 CHRDQ9H2X0 955 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 CCSER2Q9H7U1 834 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 ECT2Q9H8V3 914 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 PCDHB4Q9Y5E5 795 aa24.24■■□□□ 1.47
CAPN1-222ENST00000532285 PAEPP09466 180 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 VDRP11473 427 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 NR1H3Q13133 447 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 DGKKQ5KSL6 1271 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 TMEM270Q6UE05 265 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 IRF2BP1Q8IU81 584 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 GPT2Q8TD30 523 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 INTS2Q9H0H0 1204 aaKnown RBP24.23■■□□□ 1.47
CAPN1-222ENST00000532285 LINC00597Q9H2U6 94 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 THAP9Q9H5L6 903 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 HESX1Q9UBX0 185 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 FANCMQ8IYD8 2048 aa24.23■■□□□ 1.47
CAPN1-222ENST00000532285 SLC9A3R1O14745 358 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-222ENST00000532285 CYP26A1O43174 497 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 TLR5O60602 858 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 CD19P15391 556 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 NBL1P41271 181 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 PGFP49763 221 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 CT47A1Q5JQC4 288 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-222ENST00000532285 MAMSTRQ6ZN01 415 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 RRAGAQ7L523 313 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 CCDC186Q7Z3E2 898 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 ARHGEF19Q8IW93 802 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 FAM114A1Q8IWE2 563 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 EXOC4Q96A65 974 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 NACA2Q9H009 215 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 CFAP97Q9P2B7 532 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 TSPAN16Q9UKR8 245 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 FBXO4Q9UKT5 387 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 USP3Q9Y6I4 520 aa24.22■■□□□ 1.47
CAPN1-222ENST00000532285 VPS13AQ96RL7 3174 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 TRDMT1O14717 391 aaKnown RBP24.21■■□□□ 1.47
CAPN1-222ENST00000532285 NFATC1O95644 943 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 SP9P0CG40 484 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 HOXD11P31277 338 aaPredicted RBP24.21■■□□□ 1.47
CAPN1-222ENST00000532285 MTIF2P46199 727 aaKnown RBP24.21■■□□□ 1.47
CAPN1-222ENST00000532285 PSEN1P49768 467 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 MRE11P49959 708 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 BCAT1P54687 386 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 MTAPQ13126 283 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 GOLGA7BQ2TAP0 167 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 TTC30AQ86WT1 665 aa24.21■■□□□ 1.47
CAPN1-222ENST00000532285 MAML2Q8IZL2 1156 aaPredicted RBP24.21■■□□□ 1.47
CAPN1-222ENST00000532285 KAT5Q92993 513 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms