RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 EPHB3P54753 998 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 GSCP56915 257 aaPredicted RBP13.19□□□□□ -0.3
COPB1-208ENST00000532088 MAP3K7CLP57077 242 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 HYAL1Q12794 435 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 CLEC16AQ2KHT3 1053 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 CTC1Q2NKJ3 1217 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 DENND1BQ6P3S1 775 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 ZDHHC17Q8IUH5 632 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 LRRC8AQ8IWT6 810 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 POM121Q96HA1 1249 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 VCPIP1Q96JH7 1222 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 SEPT5Q99719 369 aaPredicted RBP13.19□□□□□ -0.3
COPB1-208ENST00000532088 BAG1Q99933 345 aaPredicted RBP13.19□□□□□ -0.3
COPB1-208ENST00000532088 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
COPB1-208ENST00000532088 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 IL37Q9NZH6 218 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
COPB1-208ENST00000532088 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 FAM92AA1XBS5 289 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 F8VP50 259 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.3
COPB1-208ENST00000532088 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 PER2O15055 1255 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 BEST1O76090 585 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CSPG5O95196 566 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 RTN3O95197 1032 aaPredicted RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 LCA5LO95447 670 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CALCAP01258 141 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 LRG1P02750 347 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CSH1P0DML2 217 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CSH2P0DML3 217 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 EPCAMP16422 314 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 HOXB8P17481 243 aaPredicted RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 ATF6P18850 670 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 GABRB2P47870 512 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 PDCLQ13371 301 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 ADAM15Q13444 863 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 RBM23Q86U06 439 aaKnown RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 PHF13Q86YI8 300 aaPredicted RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 TMEM139Q8IV31 216 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 TTC9BQ8N6N2 239 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 ZNF511Q8NB15 262 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 PSMG2Q969U7 264 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 MYRFLQ96LU7 910 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 CDX2Q99626 313 aaPredicted RBP13.18□□□□□ -0.3
COPB1-208ENST00000532088 CHP1Q99653 195 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 TTLL2Q9BWV7 592 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 DEF6Q9H4E7 631 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 SFXN1Q9H9B4 322 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 TMEM30AQ9NV96 361 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 MTMR10Q9NXD2 777 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 NENFQ9UMX5 172 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 USP3Q9Y6I4 520 aa13.18□□□□□ -0.3
COPB1-208ENST00000532088 NCANO14594 1321 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 SART1O43290 800 aaKnown RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 XYLBO75191 536 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 RTN2O75298 545 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 FBXO21O94952 628 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 FGF19O95750 216 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 GLP2RO95838 553 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 IGFBP4P22692 258 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 MMP8P22894 467 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 SCNN1AP37088 669 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 KIF11P52732 1056 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 SLC5A3P53794 718 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 SH3BP2P78314 561 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 TWF1Q12792 350 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 DDR2Q16832 855 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 NAA35Q5VZE5 725 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 DENND5BQ6ZUT9 1274 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 NUP93Q8N1F7 819 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 ELMOD1Q8N336 334 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 DEFB123Q8N688 67 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 LEMD2Q8NC56 503 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms