RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TXNDC5Q8NBS9 432 aaKnown RBP19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 RLN3Q8WXF3 142 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 FOXD4L4Q8WXT5 416 aaPredicted RBP19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 KCNK16Q96T55 309 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 PNKPQ96T60 521 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 SLC39A2Q9NP94 309 aa19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 CIZ1Q9ULV3 898 aaPredicted RBP19.59■□□□□ 0.73
SSSCA1-206ENST00000531405 SGK1O00141 431 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 SLC9A3R1O14745 358 aaPredicted RBP19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 CUTAO60888 179 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 KAT7O95251 611 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 YWHAQP27348 245 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 DHPSP49366 369 aaPredicted RBP19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 MRPS21P82921 87 aaKnown RBP19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 SHC2P98077 582 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 SCARA5Q6ZMJ2 495 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 UNC13DQ70J99 1090 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 CYP2U1Q7Z449 544 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 NUP93Q8N1F7 819 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 FRMD1Q8N878 549 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 IL17RCQ8NAC3 791 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 SCAMP5Q8TAC9 235 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 PLEKHO2Q8TD55 490 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 FBXO32Q969P5 355 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 CHORDC1Q9UHD1 332 aaPredicted RBP19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 IGF2RP11717 2491 aa19.58■□□□□ 0.72
SSSCA1-206ENST00000531405 K7ELQ4 463 aaPredicted RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 POLR2DO15514 142 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 COCHO43405 550 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 PHACTR2O75167 634 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 CLSTN1O94985 981 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 STAU1O95793 577 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 ADH1CP00326 375 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 APODP05090 189 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 FAM163BP0C2L3 166 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 ADH5P11766 374 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 NOVA1P51513 510 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 FOXD4L6Q3SYB3 417 aaPredicted RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 LY6G5CQ5SRR4 150 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 FOXD4L3Q6VB84 417 aaPredicted RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 FAM35AQ86V20 835 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 C11orf74Q86VG3 221 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 KIAA1958Q8N8K9 716 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 OLIG1Q8TAK6 271 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 SYAP1Q96A49 352 aaPredicted RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 ZFRQ96KR1 1074 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 ZNF396Q96N95 335 aaPredicted RBP19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 MED10Q9BTT4 135 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 ARHGEF4Q9NR80 690 aa19.57■□□□□ 0.72
SSSCA1-206ENST00000531405 PCNX2A6NKB5 2137 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 KHNYNO15037 678 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 RTN3O95197 1032 aaPredicted RBP19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 YEATS4O95619 227 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 ATICP31939 592 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 EIF2DP41214 584 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 KIR2DL1P43626 348 aaPredicted RBP19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 AFMP43652 599 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 SNRPFP62306 86 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 BIRC3Q13489 604 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 CUL4BQ13620 913 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 PAQR9Q6ZVX9 377 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 ARMCX6Q7L4S7 300 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 DDX42Q86XP3 938 aaKnown RBP eCLIP19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 NAT16Q8N8M0 369 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 PIGKQ92643 395 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 WBP2Q969T9 261 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 SDCBP2Q9H190 292 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 CCSER2Q9H7U1 834 aa19.56■□□□□ 0.72
SSSCA1-206ENST00000531405 E2F8A0AVK6 867 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 TNFRSF10BO14763 440 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 EXOC3O60645 756 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 ADAM23O75077 832 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 ALDH1A2O94788 518 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 SLC5A3P53794 718 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 IRX4P78413 519 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 BMT2Q1RMZ1 405 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 ZNF699Q32M78 642 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 HECTD3Q5T447 861 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 DAB2IPQ5VWQ8 1189 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 C12orf56Q8IXR9 622 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 GRAMD1CQ8IYS0 662 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 PHTF2Q8N3S3 785 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 PDZD8Q8NEN9 1154 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 HMGB4Q8WW32 186 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 TMEM9BQ9NQ34 198 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 GMIPQ9P107 970 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 BCCIPQ9P287 314 aaKnown RBP eCLIP19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 TBC1D14Q9P2M4 693 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 SPEGQ15772 3267 aa19.55■□□□□ 0.72
SSSCA1-206ENST00000531405 ATP8B3O60423 1300 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 LRRIQ3A6PVS8 624 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 CDX4O14627 284 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 IRF1P10914 325 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 P2RY2P41231 377 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 GRIA2P42262 883 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 ORC1Q13415 861 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 KNOP1Q1ED39 458 aaKnown RBP19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 ZNF667Q5HYK9 610 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 EOGTQ5NDL2 527 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms