RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
BRK1-201ENST00000530758 ACADSBP45954 432 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 TAF10Q12962 218 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 ASIC2Q16515 512 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.9■□□□□ 0.3
BRK1-201ENST00000530758 TMEM35BQ8NCS4 154 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 STKLD1Q8NE28 680 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 PDZD8Q8NEN9 1154 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 SHKBP1Q8TBC3 707 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 SLC20A1Q8WUM9 679 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 PHF7Q9BWX1 381 aaPredicted RBP16.9■□□□□ 0.3
BRK1-201ENST00000530758 GRPEL1Q9HAV7 217 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 CNGB3Q9NQW8 809 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 PRKAG3Q9UGI9 489 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
BRK1-201ENST00000530758 MRPS23Q9Y3D9 190 aaKnown RBP16.9■□□□□ 0.3
BRK1-201ENST00000530758 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
BRK1-201ENST00000530758 ZNF840PA6NDX5 716 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 NRG2O14511 850 aaPredicted RBP16.89■□□□□ 0.29
BRK1-201ENST00000530758 TPM1P09493 284 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 MYL4P12829 197 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 DDX6P26196 483 aaKnown RBP eCLIP16.89■□□□□ 0.291e-8■□□□□ 11.1
BRK1-201ENST00000530758 GABRB2P47870 512 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 TKTL1P51854 596 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 ARID5AQ03989 594 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 WDR59Q6PJI9 974 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 POTEHQ6S545 545 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 MON1AQ86VX9 555 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 CNGA4Q8IV77 575 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 ITFG1Q8TB96 612 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 TCEAL4Q96EI5 215 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 PCDHB18PQ96TA0 734 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 LRRC4Q9HBW1 653 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 GDE1Q9NZC3 331 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 CEP83Q9Y592 693 aa16.89■□□□□ 0.29
BRK1-201ENST00000530758 A0A1W2PRU2 124 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
BRK1-201ENST00000530758 MFAP3LO75121 409 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 FBXO21O94952 628 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 ZBED1O96006 694 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 SERPING1P05155 500 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 PSEN1P49768 467 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 NOMO3P69849 1222 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 CDK17Q00537 523 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 KLHL30Q0D2K2 578 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 PDCLQ13371 301 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 TAF3Q5VWG9 929 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 BHLHA9Q7RTU4 235 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 ZNF571Q7Z3V5 609 aaPredicted RBP16.88■□□□□ 0.29
BRK1-201ENST00000530758 TC2NQ8N9U0 490 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 SLC30A5Q8TAD4 765 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 IRGQQ8WZA9 623 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 FGF13Q92913 245 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 NOX5Q96PH1 765 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 ATXN3LQ9H3M9 355 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 ABHD10Q9NUJ1 306 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 TRPM5Q9NZQ8 1165 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 IMPACTQ9P2X3 320 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 EPS15L1Q9UBC2 864 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 CDH7Q9ULB5 785 aa16.88■□□□□ 0.29
BRK1-201ENST00000530758 NUP210Q8TEM1 1887 aaPredicted RBP16.88■□□□□ 0.29
BRK1-201ENST00000530758 LOC730098B7Z3J9 87 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 GZMAP12544 262 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 LAMP2P13473 410 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 TUBP50607 506 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 SNX16P57768 344 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 DAOAP59103 153 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 CENPCQ03188 943 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 OTOP3Q7RTS5 596 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 PASD1Q8IV76 773 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 NPAS3Q8IXF0 933 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
BRK1-201ENST00000530758 FBXO32Q969P5 355 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 CPXM1Q96SM3 734 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 ULBP1Q9BZM6 244 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 PDCL3Q9H2J4 239 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 TASP1Q9H6P5 420 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 CLIC5Q9NZA1 410 aa16.87■□□□□ 0.29
BRK1-201ENST00000530758 CHORDC1Q9UHD1 332 aaPredicted RBP16.87■□□□□ 0.29
BRK1-201ENST00000530758 OLFM2O95897 454 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 USP17L7P0C7H9 530 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 SKILP12757 684 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 CEBPBP17676 345 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 TNFAIP3P21580 790 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 MMP8P22894 467 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 RGS7P49802 495 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 ADKP55263 362 aaKnown RBP16.86■□□□□ 0.29
BRK1-201ENST00000530758 ADIGQ0VDE8 80 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
BRK1-201ENST00000530758 TEAD2Q15562 447 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 CLEC16AQ2KHT3 1053 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 PTPN20Q4JDL3 420 aa16.86■□□□□ 0.29
BRK1-201ENST00000530758 ARHGAP15Q53QZ3 475 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms