RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TPGS2Q68CL5 300 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 VSTM1Q6UX27 236 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 HFE2Q6ZVN8 426 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 KREMEN2Q8NCW0 462 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 JOSD2Q8TAC2 188 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 C2orf15Q8WU43 125 aaKnown RBP11.2□□□□□ -0.62
SOX6-213ENST00000530378 RFFLQ8WZ73 363 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 FAM149B1Q96BN6 582 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 TRIM11Q96F44 468 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 C16orf45Q96MC5 204 aaPredicted RBP11.2□□□□□ -0.62
SOX6-213ENST00000530378 SELENOOQ9BVL4 669 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 TTYH1Q9H313 450 aaPredicted RBP11.2□□□□□ -0.62
SOX6-213ENST00000530378 IGFLR1Q9H665 355 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 ABCB6Q9NP58 842 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 MAN1C1Q9NR34 630 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 FBXW11Q9UKB1 542 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 HYOU1Q9Y4L1 999 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 IRAK3Q9Y616 596 aa11.2□□□□□ -0.62
SOX6-213ENST00000530378 OBSL1O75147 1896 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 KRT86O43790 486 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 RFPL2O75678 378 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 CYP1A2P05177 515 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 C8AP07357 584 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 GABRB2P47870 512 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 PGFP49763 221 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 CLCN4P51793 760 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 PLD1Q13393 1074 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 MAMLD1Q13495 774 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 DCUN1D2Q6PH85 259 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 OLFML1Q6UWY5 402 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 TMEM110Q86TL2 294 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 SLC22A17Q8WUG5 538 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 HSFY1Q96LI6 401 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 C8orf48Q96LL4 319 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 ANAPC7Q9UJX3 599 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 STRIP2Q9ULQ0 834 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 SLC38A8A6NNN8 435 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 YJEFN3A6XGL0 299 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 E7ENQ6 273 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 CCL16O15467 120 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 ZBED1O96006 694 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 MYBL1P10243 752 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 FLT3P36888 993 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 ACADSBP45954 432 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 DNA2P51530 1060 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
SOX6-213ENST00000530378 SLC6A3Q01959 620 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 SMARCB1Q12824 385 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 RAB41Q5JT25 222 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 PLEKHA7Q6IQ23 1121 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 TRNP1Q6NT89 227 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 NUP93Q8N1F7 819 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 MICALL1Q8N3F8 863 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 C3orf20Q8ND61 904 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 STK32AQ8WU08 396 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 KCTD13Q8WZ19 329 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 EDEM1Q92611 657 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 MCRS1Q96EZ8 462 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 TSGA10Q9BZW7 698 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 TLE6Q9H808 572 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 PARVAQ9NVD7 372 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 GMIPQ9P107 970 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 INTUQ9ULD6 942 aa11.19□□□□□ -0.62
SOX6-213ENST00000530378 C2orf16Q68DN1 1984 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 PRUNE2Q8WUY3 3088 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 TCRBV5S1A1TA0A578 114 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 ESPNB1AK53 854 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 KRT3P12035 628 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 TNNT1P13805 278 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 RFC1P35251 1148 aaPredicted RBP11.18□□□□□ -0.62
SOX6-213ENST00000530378 TUFMP49411 452 aaKnown RBP11.18□□□□□ -0.62
SOX6-213ENST00000530378 DAOAP59103 153 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 MRPS5P82675 430 aaKnown RBP11.18□□□□□ -0.62
SOX6-213ENST00000530378 OGDHQ02218 1023 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 MESDQ14696 234 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 GRIN2CQ14957 1233 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 TAF12Q16514 161 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 CDO1Q16878 200 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 LRIT3Q3SXY7 679 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 PPP1R2P3Q6NXS1 205 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 LILRA6Q6PI73 481 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 TCEAL8Q8IYN2 117 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 TXLNBQ8N3L3 684 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 FBXO32Q969P5 355 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 VCPIP1Q96JH7 1222 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 AVENQ9NQS1 362 aaPredicted RBP11.18□□□□□ -0.62
SOX6-213ENST00000530378 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 NUDT5Q9UKK9 219 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 USTQ9Y2C2 406 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 HCFC2Q9Y5Z7 792 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 SCINQ9Y6U3 715 aa11.18□□□□□ -0.62
SOX6-213ENST00000530378 ANAPC1Q9H1A4 1944 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms