RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 GKN1Q9NS71 199 aa17.8■□□□□ 0.44
SF3B2-209ENST00000530322 TSPAN16Q9UKR8 245 aa17.8■□□□□ 0.44
SF3B2-209ENST00000530322 KIAA1257Q9ULG3 409 aa17.8■□□□□ 0.44
SF3B2-209ENST00000530322 CNTN6Q9UQ52 1028 aa17.8■□□□□ 0.44
SF3B2-209ENST00000530322 SCML2Q9UQR0 700 aa17.8■□□□□ 0.44
SF3B2-209ENST00000530322 SIT1Q9Y3P8 196 aa17.8■□□□□ 0.44
SF3B2-209ENST00000530322 O00370 1275 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 GLULP15104 373 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 PON1P27169 355 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 TUBP50607 506 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 ZNF132P52740 706 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 NUBP1P53384 320 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 TNK2Q07912 1038 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 MTF1Q14872 753 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 GOLGA7BQ2TAP0 167 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 VWA3BQ502W6 1294 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 ZNF852Q6ZMS4 543 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 RBBP8NLQ8NC74 664 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-209ENST00000530322 TFAP2BQ92481 460 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 OSBPL6Q9BZF3 934 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 LTB4R2Q9NPC1 389 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 GTSE1Q9NYZ3 720 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 DLGAP2Q9P1A6 1054 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 MTF2Q9Y483 593 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-209ENST00000530322 USP3Q9Y6I4 520 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 PIAS3Q9Y6X2 628 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 MUC6Q6W4X9 2439 aa17.79■□□□□ 0.44
SF3B2-209ENST00000530322 MAN2B1O00754 1011 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 CYP26A1O43174 497 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 COCHO43405 550 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 PRKCSHP14314 528 aaPredicted RBP17.78■□□□□ 0.44
SF3B2-209ENST00000530322 EEF1GP26641 437 aaKnown RBP17.78■□□□□ 0.44
SF3B2-209ENST00000530322 BCAT1P54687 386 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 APBA1Q02410 837 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 RAB41Q5JT25 222 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 HECTD3Q5T447 861 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 CDKAL1Q5VV42 579 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 GJB7Q6PEY0 223 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 ENOSF1Q7L5Y1 443 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 PIGZQ86VD9 579 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 CCDC105Q8IYK2 499 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 PRSS33Q8NF86 280 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 PRRX2Q99811 253 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 ZSWIM1Q9BR11 485 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 CCSER2Q9H7U1 834 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 HPS4Q9NQG7 708 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 TLR8Q9NR97 1041 aaKnown RBP17.78■□□□□ 0.44
SF3B2-209ENST00000530322 HESX1Q9UBX0 185 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 APEX2Q9UBZ4 518 aa17.78■□□□□ 0.44
SF3B2-209ENST00000530322 FAM170BA6NMN3 283 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 LEFTY2O00292 366 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 TULP2O00295 520 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 XPO1O14980 1071 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 CALCAP01258 141 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 DCNP07585 359 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 MBL2P11226 248 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 TARSP26639 723 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 MFAP3P55082 362 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 SLC8A3P57103 927 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 PDE4CQ08493 712 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 BST2Q10589 180 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 UBXN2BQ14CS0 331 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 ITPRIPL2Q3MIP1 535 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 PKDCCQ504Y2 493 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 TRIM68Q6AZZ1 485 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 CC2D1AQ6P1N0 951 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 LCLAT1Q6UWP7 414 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 CCDC186Q7Z3E2 898 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 ZNF687Q8N1G0 1237 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 TTC16Q8NEE8 873 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 FAM3CQ92520 227 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 MSANTD3Q96H12 275 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 ZFRQ96KR1 1074 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 FAM81BQ96LP2 452 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 NELL2Q99435 816 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 C8orf33Q9H7E9 229 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 NMUR1Q9HB89 426 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 SIX2Q9NPC8 291 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 OSER1Q9NX31 292 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 SMPD4Q9NXE4 827 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 MRPS17Q9Y2R5 130 aaKnown RBP17.77■□□□□ 0.44
SF3B2-209ENST00000530322 CPQQ9Y646 472 aa17.77■□□□□ 0.44
SF3B2-209ENST00000530322 OTOL1A6NHN0 477 aaPredicted RBP17.76■□□□□ 0.43
SF3B2-209ENST00000530322 GALR2O43603 387 aaPredicted RBP17.76■□□□□ 0.43
SF3B2-209ENST00000530322 ARSAP15289 507 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 BRD2P25440 801 aaKnown RBP17.76■□□□□ 0.43
SF3B2-209ENST00000530322 SOX9P48436 509 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 KPNA1P52294 538 aaPredicted RBP17.76■□□□□ 0.43
SF3B2-209ENST00000530322 TYRO3Q06418 890 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 RUNX3Q13761 415 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 PDGFRLQ15198 375 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 CNGA2Q16280 664 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 DPY19L2P1Q6NXN4 242 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 RALGPS2Q86X27 583 aaPredicted RBP17.76■□□□□ 0.43
SF3B2-209ENST00000530322 KIAA1958Q8N8K9 716 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 TTC8Q8TAM2 541 aa17.76■□□□□ 0.43
SF3B2-209ENST00000530322 UBA3Q8TBC4 463 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms