RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TMEM233B4DJY2 109 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 GCOM1H8Y6P7 765 aaPredicted RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 TXNP10599 105 aaKnown RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 NDUFB7P17568 137 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 PPIFP30405 207 aaKnown RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 CCT8P50990 548 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 SP2Q02086 613 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 KRT17Q04695 432 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 PUM3Q15397 648 aaKnown RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF551Q7Z340 670 aaPredicted RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 TXLNBQ8N3L3 684 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF527Q8NB42 609 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 CYP2W1Q8TAV3 490 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 SARAFQ96BY9 339 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 EIF2AQ9BY44 585 aaKnown RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 STK33Q9BYT3 514 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 AGO4Q9HCK5 861 aaKnown RBP5.45□□□□□ -1.54
C11orf88-204ENST00000529661 ARHGEF3Q9NR81 526 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 LUZP4Q9P127 313 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 MAN2B2Q9Y2E5 1009 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 CEP83Q9Y592 693 aa5.45□□□□□ -1.54
C11orf88-204ENST00000529661 GOLGA6L3A6NEY3 463 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 TLR5O60602 858 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 A1BGP04217 495 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF37AP17032 561 aaPredicted RBP5.44□□□□□ -1.54
C11orf88-204ENST00000529661 KLRC1P26715 233 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 CHKAP35790 457 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 LIPAP38571 399 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 GRK6P43250 576 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ALDH9A1P49189 494 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 WNT3P56703 355 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 C21orf58P58505 322 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ICA1Q05084 483 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 E2F2Q14209 437 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 CCDC142Q17RM4 750 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 TREML2Q5T2D2 321 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 DCAF12L1Q5VU92 463 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 TLDC1Q6P9B6 456 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 DTX2Q86UW9 622 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF280BQ86YH2 543 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 SMAP1Q8IYB5 467 aaPredicted RBP5.44□□□□□ -1.54
C11orf88-204ENST00000529661 IPCEF1Q8WWN9 437 aaPredicted RBP5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ATG4AQ8WYN0 398 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 RAPGEF4Q8WZA2 1011 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 MS4A7Q9GZW8 240 aaPredicted RBP5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ADARB2Q9NS39 739 aaKnown RBP5.44□□□□□ -1.54
C11orf88-204ENST00000529661 TM7SF3Q9NS93 570 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 ADAM21Q9UKJ8 722 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 NDRG4Q9ULP0 352 aaKnown RBP5.44□□□□□ -1.54
C11orf88-204ENST00000529661 CAPN11Q9UMQ6 739 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 WNT6Q9Y6F9 365 aa5.44□□□□□ -1.54
C11orf88-204ENST00000529661 SLC16A3O15427 465 aaKnown RBP5.43□□□□□ -1.54
C11orf88-204ENST00000529661 KCNQ3O43525 872 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 FESP07332 822 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 IL6RP08887 468 aaPredicted RBP5.43□□□□□ -1.54
C11orf88-204ENST00000529661 CYP2C9P11712 490 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 XRCC6P12956 609 aaKnown RBP eCLIP5.43□□□□□ -1.54
C11orf88-204ENST00000529661 WT1P19544 449 aaPredicted RBP5.43□□□□□ -1.54
C11orf88-204ENST00000529661 DRD4P21917 467 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 FBLP22087 321 aaKnown RBP5.43□□□□□ -1.54
C11orf88-204ENST00000529661 ITPKBP27987 946 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 PCSK6P29122 969 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 CARSP49589 748 aaKnown RBP5.43□□□□□ -1.54
C11orf88-204ENST00000529661 MYO1EQ12965 1108 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 STARD3Q14849 445 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 NPY5RQ15761 445 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 MGAT5BQ3V5L5 792 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 CCDC38Q502W7 563 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 ZDHHC24Q6UX98 284 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 KRT28Q7Z3Y7 464 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 GAS2L3Q86XJ1 694 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 SLC15A3Q8IY34 581 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 SPATA5Q8NB90 893 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 GLG1Q92896 1179 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 SPSB4Q96A44 273 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 MESP1Q9BRJ9 268 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 STK31Q9BXU1 1019 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 CXorf36Q9H7Y0 433 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 GLOD4Q9HC38 313 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 SERTAD4Q9NUC0 356 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 ITGB1BP2Q9UKP3 347 aa5.43□□□□□ -1.54
C11orf88-204ENST00000529661 PROP1O75360 226 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 CSTBP04080 98 aaKnown RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 ERBB2P04626 1255 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 JUPP14923 745 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PAX3P23760 479 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 IL1R2P27930 398 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PDIA3P30101 505 aaKnown RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 LRPAP1P30533 357 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 CYP2C18P33260 490 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PPM1FP49593 454 aaPredicted RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PRKAG1P54619 331 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PDE1AP54750 535 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 SOX10P56693 466 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 GALNT1Q10472 559 aaPredicted RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 ELF2Q15723 593 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PFKFB4Q16877 469 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 PLA1AQ53H76 456 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms