RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 CCDC33Q8N5R6 958 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 C1orf127Q8N9H9 656 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 DEFB124Q8NES8 71 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 MDGA1Q8NFP4 955 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 SH3RF2Q8TEC5 729 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 RLN3Q8WXF3 142 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 RAD54LQ92698 747 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 TRMT2BQ96GJ1 504 aaKnown RBP9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 CDK5RAP3Q96JB5 506 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 SCNM1Q9BWG6 230 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 STRA6Q9BX79 667 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 TMEM74BQ9NUR3 256 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 DDX43Q9NXZ2 648 aaKnown RBP9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 FBXO2Q9UK22 296 aaPredicted RBP9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 NME7Q9Y5B8 376 aa9.14□□□□□ -0.95
TGFBR3-208ENST00000529608 PCDH15Q96QU1 1955 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 PTPRJQ12913 1337 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SOBPA7XYQ1 873 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 AP5Z1O43299 807 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 RHOBTB1O94844 696 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 CKMP06732 381 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SLC6A11P48066 632 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 IFNAR2P48551 515 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SMARCB1Q12824 385 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SV2CQ496J9 727 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 EMC10Q5UCC4 262 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 ANO7Q6IWH7 933 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 KIAA1211LQ6NV74 962 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 KRBA2Q6ZNG9 492 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 C12orf40Q86WS4 652 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SFR1Q86XK3 245 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 TSTD1Q8NFU3 115 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 OLIG1Q8TAK6 271 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 MRFAP1L1Q96HT8 127 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 FNBP1Q96RU3 617 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 ACBD6Q9BR61 282 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 FGFBP2Q9BYJ0 223 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 TRIM5Q9C035 493 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 ST6GALNAC4Q9H4F1 302 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 FSCN3Q9NQT6 498 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 MBD1Q9UIS9 605 aaPredicted RBP9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 SIX4Q9UIU6 781 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 ZMYM5Q9UJ78 669 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 AGAP1Q9UPQ3 857 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 BAHCC1Q9P281 2608 aa9.13□□□□□ -0.95
TGFBR3-208ENST00000529608 ATXN2Q99700 1313 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 TRAV19A0A0A6YYK7 116 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 GOLGA8IPA6NC78 632 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 GOLGA8JA6NMD2 632 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 SRRM3A6NNA2 597 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 SGK1O00141 431 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 GABRDO14764 452 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 IKBKBO14920 756 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 KHNYNO15037 678 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CYP17A1P05093 508 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 USP17L7P0C7H9 530 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CSRP1P21291 193 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 LMO2P25791 158 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 PTGER3P43115 390 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 DHPSP49366 369 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CASP5P51878 434 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 AMPD2Q01433 879 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 TSPY1Q01534 308 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CRY1Q16526 586 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 NFE2Q16621 373 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 SOWAHAQ2M3V2 549 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 UAP1L1Q3KQV9 507 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CT47A1Q5JQC4 288 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ARL6IP4Q66PJ3 421 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 LMBRD2Q68DH5 695 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 LIAT1Q6ZQX7 453 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 C11orf57Q6ZUT1 292 aaPredicted RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ARMCX6Q7L4S7 300 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 DYMQ7RTS9 669 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ZNF720Q7Z2F6 126 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 SCN4BQ8IWT1 228 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ALLCQ8N6M5 410 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 KBTBD7Q8WVZ9 684 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 POMGNT1Q8WZA1 660 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ATP2A3Q93084 1043 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ACDQ96AP0 544 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CNOT6LQ96LI5 555 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CLIC6Q96NY7 704 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 FAM213AQ9BRX8 229 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 RNF38Q9H0F5 515 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 TMEM206Q9H813 350 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 TMEM9BQ9NQ34 198 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 CRTAC1Q9NQ79 661 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 TMEM30AQ9NV96 361 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 TBC1D7Q9P0N9 293 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 MMP17Q9ULZ9 603 aa9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 FCF1Q9Y324 198 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 ASCC3Q8N3C0 2202 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-208ENST00000529608 IGF2RP11717 2491 aa9.11□□□□□ -0.95
TGFBR3-208ENST00000529608 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms