RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CSGALNACT2Q8N6G5 542 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 TOP6BLQ8N6T0 577 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 LRRC52Q8N7C0 313 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 FRMD1Q8N878 549 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 HVCN1Q96D96 273 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 SPATA17Q96L03 361 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 FAM213AQ9BRX8 229 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 ST6GALNAC4Q9H4F1 302 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 GDAP2Q9NXN4 497 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 TBC1D14Q9P2M4 693 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 ITGA11Q9UKX5 1188 aa9.61□□□□□ -0.87
VPS11-203ENST00000529545 SPEGQ15772 3267 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 A0A0A0MRY4 1105 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 TBC1D3BA6NDS4 549 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 TMEM191BP0C7N4 346 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 ADH5P11766 374 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 PLCG1P19174 1290 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 BDNFP23560 247 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 CYP27A1Q02318 531 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 GAD2Q05329 585 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 KDSRQ06136 332 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 ZNF33AQ06730 810 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 SCAPQ12770 1279 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 SLC14A1Q13336 389 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 MCM6Q14566 821 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 TRIP6Q15654 476 aaKnown RBP9.6□□□□□ -0.87
VPS11-203ENST00000529545 GAB4Q2WGN9 574 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 EMC10Q5UCC4 262 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 PEAR1Q5VY43 1037 aaPredicted RBP9.6□□□□□ -0.87
VPS11-203ENST00000529545 SDE2Q6IQ49 451 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 CRELD2Q6UXH1 353 aaPredicted RBP9.6□□□□□ -0.87
VPS11-203ENST00000529545 DPH6Q7L8W6 267 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 OSTM1Q86WC4 334 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 DEFB119Q8N690 84 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 NOC3LQ8WTT2 800 aaKnown RBP9.6□□□□□ -0.87
VPS11-203ENST00000529545 RAD54LQ92698 747 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 SLITRK1Q96PX8 696 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 PKMYT1Q99640 499 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 SYT15Q9BQS2 421 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 CCDC86Q9H6F5 360 aaKnown RBP9.6□□□□□ -0.87
VPS11-203ENST00000529545 CAPN10Q9HC96 672 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 FSCN3Q9NQT6 498 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 SMPD4Q9NXE4 827 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 RBAKQ9NYW8 714 aaPredicted RBP9.6□□□□□ -0.87
VPS11-203ENST00000529545 CFAP97Q9P2B7 532 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 SUSD2Q9UGT4 822 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 CDH9Q9ULB4 789 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 CPQQ9Y646 472 aa9.6□□□□□ -0.87
VPS11-203ENST00000529545 A0A1W2PQD8 194 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ZNF840PA6NDX5 716 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ANTXRLA6NF34 631 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 H3BQV1 296 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 GABRDO14764 452 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 TRIM66O15016 1216 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ADAM23O75077 832 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 NDUFS2O75306 463 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ZNF217O75362 1048 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 MBL2P11226 248 aaPredicted RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 CD59P13987 128 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 GNSP15586 552 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ADSSP30520 456 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 KIR2DL1P43626 348 aaPredicted RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 FAM193AP78312 1265 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 SYCP2LQ5T4T6 812 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 TDRD10Q5VZ19 366 aaKnown RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 FAM171BQ6P995 826 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 RHBDF2Q6PJF5 856 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ZNF720Q7Z2F6 126 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 SFTPA1Q8IWL2 248 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 BRSK2Q8IWQ3 736 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 RGL4Q8IZJ4 473 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 SYCP3Q8IZU3 236 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ZNF513Q8N8E2 541 aaPredicted RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 LARP4BQ92615 738 aaKnown RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 MYLPFQ96A32 169 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 OTUB2Q96DC9 234 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ANKRD36BP1Q96IX9 119 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 ACCSQ96QU6 501 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 FIZ1Q96SL8 496 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 TTLL2Q9BWV7 592 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 FAM124BQ9H5Z6 455 aaPredicted RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 BLOC1S4Q9NUP1 217 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 DEC1Q9P2X7 70 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 APOBEC2Q9Y235 224 aaKnown RBP9.59□□□□□ -0.87
VPS11-203ENST00000529545 GON4LQ3T8J9 2241 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 NBEAQ8NFP9 2946 aa9.59□□□□□ -0.87
VPS11-203ENST00000529545 CACNA1EQ15878 2313 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
VPS11-203ENST00000529545 SH3BP5O60239 455 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 ATP2C2O75185 946 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 BMP15O95972 392 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 TNNC2P02585 160 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 HOXB2P14652 356 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 GABRG2P18507 467 aa9.58□□□□□ -0.88
VPS11-203ENST00000529545 USP46P62068 366 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms