RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 A0A1W2PQF6 199 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 SLC9A3R1O14745 358 aaPredicted RBP20.25■□□□□ 0.83
SSRP1-204ENST00000529002 ADH1CP00326 375 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 OAS1P00973 400 aaKnown RBP20.25■□□□□ 0.83
SSRP1-204ENST00000529002 PRB1P04280 392 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 SYPP08247 313 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 HOXB2P14652 356 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 NDUFV2P19404 249 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 PCSK1P29120 753 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 LHX1P48742 406 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 CACNA2D1P54289 1103 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 GRIN1Q05586 938 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 TAF10Q12962 218 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 HNRNPDQ14103 355 aaKnown RBP20.25■□□□□ 0.83
SSRP1-204ENST00000529002 C10orf76Q5T2E6 689 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 EGFLAMQ63HQ2 1017 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 SFR1Q86XK3 245 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 BRSK2Q8IWQ3 736 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 TOP6BLQ8N6T0 577 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 NOC3LQ8WTT2 800 aaKnown RBP20.25■□□□□ 0.83
SSRP1-204ENST00000529002 RAD54LQ92698 747 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 TTLL2Q9BWV7 592 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 MTMR12Q9C0I1 747 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 TMEM30AQ9NV96 361 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 NME7Q9Y5B8 376 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 MYH10P35580 1976 aa20.25■□□□□ 0.83
SSRP1-204ENST00000529002 F8VP50 259 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 TULP3O75386 442 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 SCP2P22307 547 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 ZNF720Q7Z2F6 126 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 ETFBKMTQ8IXQ9 262 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 LRRC52Q8N7C0 313 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 ADAM32Q8TC27 787 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 IL21RQ9HBE5 538 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 PDE11AQ9HCR9 933 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 TBC1D7Q9P0N9 293 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 RAD54BQ9Y620 910 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 TMEM131Q92545 1883 aa20.24■□□□□ 0.83
SSRP1-204ENST00000529002 A0A1W2PQD8 194 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 CBFA2T3O75081 653 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 PFKLP17858 780 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 ANXA13P27216 316 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 POU5F1Q01860 360 aaKnown RBP20.23■□□□□ 0.83
SSRP1-204ENST00000529002 GRIK2Q13002 908 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 VSTM1Q6UX27 236 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 TOGARAM2Q6ZUX3 1019 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 DYMQ7RTS9 669 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 RABEPKQ7Z6M1 372 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
SSRP1-204ENST00000529002 CALML4Q96GE6 196 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 PCED1BQ96HM7 432 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 CD248Q9HCU0 757 aa20.23■□□□□ 0.83
SSRP1-204ENST00000529002 EIF4E1BA6NMX2 242 aaKnown RBP20.22■□□□□ 0.83
SSRP1-204ENST00000529002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.22■□□□□ 0.83
SSRP1-204ENST00000529002 PPP1R37O75864 691 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 UBA7P41226 1012 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 RBP5P82980 135 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 GAD2Q05329 585 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 SLC14A1Q13336 389 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 RILPL1Q5EBL4 403 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 TMEM25Q86YD3 366 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 BBS7Q8IWZ6 715 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 IPO4Q8TEX9 1081 aaKnown RBP20.22■□□□□ 0.83
SSRP1-204ENST00000529002 ZNF419Q96HQ0 510 aaPredicted RBP20.22■□□□□ 0.83
SSRP1-204ENST00000529002 ZFRQ96KR1 1074 aaKnown RBP20.22■□□□□ 0.83
SSRP1-204ENST00000529002 ST6GALNAC4Q9H4F1 302 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 RBAKQ9NYW8 714 aaPredicted RBP20.22■□□□□ 0.83
SSRP1-204ENST00000529002 ITGA11Q9UKX5 1188 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 CDH9Q9ULB4 789 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 PTPRJQ12913 1337 aa20.22■□□□□ 0.83
SSRP1-204ENST00000529002 NUMA1Q14980 2115 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 KNTC1P50748 2209 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 NTSR1P30989 418 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 POSTNQ15063 836 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 ANO4Q32M45 955 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 LIMS2Q7Z4I7 341 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 TERB1Q8NA31 727 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 OR5B17Q8NGF7 314 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 SETD7Q8WTS6 366 aaKnown RBP20.21■□□□□ 0.83
SSRP1-204ENST00000529002 STRA6Q9BX79 667 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 TRIM9Q9C026 710 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 PCIF1Q9H4Z3 704 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 DEC1Q9P2X7 70 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 PCOLCE2Q9UKZ9 415 aa20.21■□□□□ 0.83
SSRP1-204ENST00000529002 APOBEC2Q9Y235 224 aaKnown RBP20.21■□□□□ 0.83
SSRP1-204ENST00000529002 COCHO43405 550 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 NDUFS2O75306 463 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 DDIT3P35638 169 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 CYP4F3Q08477 520 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 ARL6IP4Q66PJ3 421 aaKnown RBP20.2■□□□□ 0.82
SSRP1-204ENST00000529002 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 KIAA1958Q8N8K9 716 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 RASSF8Q8NHQ8 419 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 LARP4BQ92615 738 aaKnown RBP20.2■□□□□ 0.82
SSRP1-204ENST00000529002 HPDLQ96IR7 371 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 MRPL45Q9BRJ2 306 aaKnown RBP20.2■□□□□ 0.82
SSRP1-204ENST00000529002 CBWD1Q9BRT8 395 aa20.2■□□□□ 0.82
SSRP1-204ENST00000529002 TBC1D14Q9P2M4 693 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms