RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 STAT4Q14765 748 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ERMARDQ5T6L9 678 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PAXIP1Q6ZW49 1069 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 TAOK1Q7L7X3 1001 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 SH2D3CQ8N5H7 860 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 SLC2A14Q8TDB8 520 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 FAM172AQ8WUF8 416 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 P3H4Q92791 437 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 CENPTQ96BT3 561 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 SENP8Q96LD8 212 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 UROC1Q96N76 676 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ZNF670Q9BS34 389 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 TSEN34Q9BSV6 310 aaKnown RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 CALN1Q9BXU9 219 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 DSEQ9UL01 958 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 CDH9Q9ULB4 789 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PTCH2Q9Y6C5 1203 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 A0A0U1RQF3 1178 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 MOXD2PA6NHM9 499 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 NPR3P17342 541 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PCSK1P29120 753 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 THPOP40225 353 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 EIF3EP60228 445 aaKnown RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 DPYSL3Q14195 570 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 DSC3Q14574 896 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ARHGEF6Q15052 776 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 NOMO1Q15155 1222 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 TRNP1Q6NT89 227 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 LRRC31Q6UY01 552 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PPIL6Q8IXY8 311 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 GSTCDQ8NEC7 633 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PXYLP1Q8TE99 480 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 HAUS1Q96CS2 278 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 CFAP57Q96MR6 1250 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ZIC5Q96T25 663 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 C11orf84Q9BUA3 381 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ADAM7Q9H2U9 754 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 SRRDQ9UH36 339 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 DDX20Q9UHI6 824 aaKnown RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 PADI3Q9ULW8 664 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ARL5CA6NH57 179 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 TULP2O00295 520 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 APOL1O14791 398 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 SHBGP04278 402 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 CCDC130P13994 396 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 CHKAP35790 457 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 MLH1P40692 756 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 MATKP42679 507 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 NR2C2P49116 596 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 MAGOHP61326 146 aaKnown RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 CBLBQ13191 982 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 ITGA7Q13683 1181 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 C15orf59Q2T9L4 293 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 TNFAIP8L3Q5GJ75 292 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 RNASEH2BQ5TBB1 312 aaKnown RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 MAP3K21Q5TCX8 1036 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 WSCD1Q658N2 575 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 CYP4F22Q6NT55 531 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 SCYL2Q6P3W7 929 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 DSTYKQ6XUX3 929 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 CYP4V2Q6ZWL3 525 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 CENPUQ71F23 418 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 BZW1Q7L1Q6 419 aaKnown RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 OSTM1Q86WC4 334 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 RIBC1Q8N443 379 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 ACSF2Q96CM8 615 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 FAF2Q96CS3 445 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 PEBP4Q96S96 227 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 RBM15Q96T37 977 aaKnown RBP eCLIP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 GAD1Q99259 594 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 TMEM121Q9BTD3 319 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 FRMD8Q9BZ67 464 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 GOLGA2P5Q9HBQ8 144 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 LRRC4Q9HBW1 653 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 NGRNQ9NPE2 291 aaKnown RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 RCOR3Q9P2K3 495 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 NOD1Q9Y239 953 aa15.42■□□□□ 0.06
ECHDC1-220ENST00000528402 ERICH4A6NGS2 130 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 ALOX15BO15296 676 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 INPPL1O15357 1258 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 DAB1O75553 588 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 GABBR2O75899 941 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 FAM200BP0CF97 657 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 RBP3P10745 1247 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 LCP1P13796 627 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 TSHRP16473 764 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 CCND3P30281 292 aaPredicted RBP15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 NOS2P35228 1153 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 MAGEA4P43358 317 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 VPS41P49754 854 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 AIF1P55008 147 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 ATP11AP98196 1134 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 ROR1Q01973 937 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms