RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RIOX1Q9H6W3 641 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 CPNE5Q9HCH3 593 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 ALG13Q9NP73 1137 aaKnown RBP6.91□□□□□ -1.3
PCF11-202ENST00000528336 SERTAD4Q9NUC0 356 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 ASB6Q9NWX5 421 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 USP22Q9UPT9 525 aa6.91□□□□□ -1.3
PCF11-202ENST00000528336 AQP7P3A6NL99 342 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 ZAR1LA6NP61 321 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 RASA4BC9J798 803 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 RASA4O43374 803 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 FAM163BP0C2L3 166 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 HARSP12081 509 aaKnown RBP6.9□□□□□ -1.3
PCF11-202ENST00000528336 ENGP17813 658 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 PCSK6P29122 969 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 CCT8P50990 548 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 PMS2P11Q13670 270 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 ARL13BQ3SXY8 428 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 GRASPQ7Z6J2 395 aaPredicted RBP6.9□□□□□ -1.3
PCF11-202ENST00000528336 ARHGEF25Q86VW2 580 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 SVIPQ8NHG7 77 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 SLC17A6Q9P2U8 582 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 INSL6Q9Y581 213 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 RPS6KL1Q9Y6S9 549 aa6.9□□□□□ -1.3
PCF11-202ENST00000528336 QSOX1O00391 747 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 TM4SF4P48230 202 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 CLK3P49761 638 aaKnown RBP6.89□□□□□ -1.31
PCF11-202ENST00000528336 GATMP50440 423 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 PGDP52209 483 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 CACNA2D1P54289 1103 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 UBE4AQ14139 1066 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 ZNF362Q5T0B9 420 aaPredicted RBP6.89□□□□□ -1.31
PCF11-202ENST00000528336 DPY19L3Q6ZPD9 716 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 BEND5Q7L4P6 421 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 FAM186BQ8IYM0 893 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 CCDC150Q8NCX0 1101 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 ELAC2Q9BQ52 826 aaKnown RBP6.89□□□□□ -1.31
PCF11-202ENST00000528336 KLK15Q9H2R5 256 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 FAM83DQ9H4H8 585 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 HEYLQ9NQ87 328 aaPredicted RBP6.89□□□□□ -1.31
PCF11-202ENST00000528336 DLL3Q9NYJ7 618 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 MYO1AQ9UBC5 1043 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 PNMA2Q9UL42 364 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 SH2B3Q9UQQ2 575 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 DRG1Q9Y295 367 aaKnown RBP6.89□□□□□ -1.31
PCF11-202ENST00000528336 CFTRP13569 1480 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 LAMC3Q9Y6N6 1575 aa6.89□□□□□ -1.31
PCF11-202ENST00000528336 NESP48681 1621 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 A0A1W2PPC4 97 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 PSMD9O00233 223 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 AREL1O15033 823 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 YY1P25490 414 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 EPHA3P29320 983 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 NTSR1P30989 418 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 MTHFSP49914 203 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 FOXD4Q12950 439 aaPredicted RBP6.88□□□□□ -1.31
PCF11-202ENST00000528336 HDAC1Q13547 482 aaPredicted RBP6.88□□□□□ -1.31
PCF11-202ENST00000528336 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 PARS2Q7L3T8 475 aaKnown RBP6.88□□□□□ -1.31
PCF11-202ENST00000528336 SKAP1Q86WV1 359 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 OR2C3Q8N628 320 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 VGLL2Q8N8G2 317 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 C11orf44Q8N8P7 122 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 ZG16BQ96DA0 208 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 SLC39A13Q96H72 371 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 SENP7Q9BQF6 1050 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 COLEC11Q9BWP8 271 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 CERS4Q9HA82 394 aa6.88□□□□□ -1.31
PCF11-202ENST00000528336 RGS17Q9UGC6 210 aaPredicted RBP6.88□□□□□ -1.31
PCF11-202ENST00000528336 AGPSO00116 658 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 AP4M1O00189 453 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 MYL4P12829 197 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 ATICP31939 592 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 TPTEP56180 551 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 EEFSECP57772 596 aaKnown RBP6.87□□□□□ -1.31
PCF11-202ENST00000528336 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 MANEALQ5VSG8 457 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 IZUMO3Q5VZ72 239 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 AMIGO2Q86SJ2 522 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 ACRBPQ8NEB7 543 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 UROC1Q96N76 676 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 HIST1H2AAQ96QV6 131 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 MAGEB5Q9BZ81 275 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 NLRC4Q9NPP4 1024 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 PADI4Q9UM07 663 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 CAPN11Q9UMQ6 739 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 MAN2B2Q9Y2E5 1009 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 PCDHGB2Q9Y5G2 931 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 ENTPD2Q9Y5L3 495 aa6.87□□□□□ -1.31
PCF11-202ENST00000528336 PDS5BQ9NTI5 1447 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 A0A087WZ62 844 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 H0YIZ8 118 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 GCOM1H8Y6P7 765 aaPredicted RBP6.86□□□□□ -1.31
PCF11-202ENST00000528336 FGF18O76093 207 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 E2F1Q01094 437 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 PCID2Q5JVF3 399 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 ANKRD16Q6P6B7 361 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms