RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 NDUFV2P19404 249 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 POLR2BP30876 1174 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 NTSR1P30989 418 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 SOWAHAQ2M3V2 549 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 LY6G5CQ5SRR4 150 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 DPH6Q7L8W6 267 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 METTL3Q86U44 580 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 DDX42Q86XP3 938 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 FOXJ1Q92949 421 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 PCDHGB2Q9Y5G2 931 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 NAV2Q8IVL1 2488 aa17.36■□□□□ 0.37
CHMP4A-203ENST00000527154 E9PAM4 449 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 ATXN7O15265 892 aaPredicted RBP17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 HUS1O60921 280 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 TULP3O75386 442 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 PPP1R37O75864 691 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 GAD2Q05329 585 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 KDSRQ06136 332 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 C4orf50Q6ZRC1 276 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 SCN4BQ8IWT1 228 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 ADGRF2Q8IZF7 708 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 KBTBD7Q8WVZ9 684 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 STRA6Q9BX79 667 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 CRTAC1Q9NQ79 661 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 EHD2Q9NZN4 543 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 CFAP97Q9P2B7 532 aa17.35■□□□□ 0.37
CHMP4A-203ENST00000527154 TBC1D3BA6NDS4 549 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 TRABD2BA6NFA1 517 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 CYSRT1A8MQ03 144 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 PRB1P04280 392 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 ITGB3P05106 788 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 BNC1Q01954 994 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 PREPLQ4J6C6 727 aaPredicted RBP17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 BRSK2Q8IWQ3 736 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 MYCT1Q8N699 235 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 IPO4Q8TEX9 1081 aaKnown RBP17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 SLC39A7Q92504 469 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 MRGPRX1Q96LB2 322 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 CD93Q9NPY3 652 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 BLOC1S4Q9NUP1 217 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 SIX4Q9UIU6 781 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 ITGA11Q9UKX5 1188 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 CDH9Q9ULB4 789 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 CYP8B1Q9UNU6 501 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 AGAP1Q9UPQ3 857 aa17.34■□□□□ 0.37
CHMP4A-203ENST00000527154 PTPRQQ9UMZ3 2332 aa17.33■□□□□ 0.37
CHMP4A-203ENST00000527154 A0A1B0GTW7 788 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 ATP2C2O75185 946 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 PLA2G2AP14555 144 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 GNSP15586 552 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 CYP4F3Q08477 520 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 SMAD1Q15797 465 aaKnown RBP17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 PTPRNQ16849 979 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 WDR45BQ5MNZ6 344 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 SYCP2LQ5T4T6 812 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 GALNT15Q8N3T1 639 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 C1orf216Q8TAB5 229 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 MYLPFQ96A32 169 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 C8orf48Q96LL4 319 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 PRORYQ9H606 182 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 SMPD4Q9NXE4 827 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 DEC1Q9P2X7 70 aa17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 MAGEC2Q9UBF1 373 aaPredicted RBP17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 GOLGA4Q13439 2230 aaKnown RBP17.33■□□□□ 0.36
CHMP4A-203ENST00000527154 GFRA2O00451 464 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 FAM13AO94988 1023 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 ATXN1LP0C7T5 689 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 BDNFP23560 247 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 LMO2P25791 158 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 MAPRE1Q15691 268 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 C10orf76Q5T2E6 689 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 SNX30Q5VWJ9 437 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 EGFLAMQ63HQ2 1017 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 CADM4Q8NFZ8 388 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 ACOX2Q99424 681 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 PLIN2Q99541 437 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 CDC6Q99741 560 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 SYT15Q9BQS2 421 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 IKZF4Q9H2S9 585 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 IL21RQ9HBE5 538 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 TMEM30AQ9NV96 361 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 WSB2Q9NYS7 404 aaPredicted RBP17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 SNX9Q9Y5X1 595 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 KNTC1P50748 2209 aa17.32■□□□□ 0.36
CHMP4A-203ENST00000527154 CABIN1Q9Y6J0 2220 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 TRIM66O15016 1216 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 FLRT2O43155 660 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 GREM1O60565 184 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 CILPO75339 1184 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 TAF10Q12962 218 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 POSTNQ15063 836 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 ARL6IP4Q66PJ3 421 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 PDCD7Q8N8D1 485 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 HVCN1Q96D96 273 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 PCED1BQ96HM7 432 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms