RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 CDK9P50750 372 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 SLC5A3P53794 718 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 KCNQ4P56696 695 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 C21orf59P57076 290 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 PSMC1P62191 440 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 MRPS22P82650 360 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 KLF1Q13351 362 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 FLOT2Q14254 428 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 RNASEH2BQ5TBB1 312 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 TTBK2Q6IQ55 1244 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 BORAQ6PGQ7 559 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ZCCHC23Q6ZST2 131 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 GPR141Q7Z602 305 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 RSPH3Q86UC2 560 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 CLVS1Q8IUQ0 354 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 SCAIQ8N9R8 606 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 DCAKDQ8WVC6 231 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 BORCS5Q969J3 196 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 CFAP36Q96G28 342 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 SERAC1Q96JX3 654 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 CCDC106Q9BWC9 280 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ZNF395Q9H8N7 513 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 PCDH9Q9HC56 1237 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 XAB2Q9HCS7 855 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 MRPL47Q9HD33 250 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 FETUBQ9UGM5 382 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 TMEM98Q9Y2Y6 226 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 SF3B1O75533 1304 aaKnown RBP eCLIP4.89□□□□□ -1.635e-6■■■■■ 172.3
HIPK3-204ENST00000525975 UBE4BO95155 1302 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ATRNL1Q5VV63 1379 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 DCCP43146 1447 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 TNS2Q63HR2 1409 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 KANSL1LA0AUZ9 987 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 GOLGA8IPA6NC78 632 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 GOLGA8JA6NMD2 632 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 NOP56O00567 594 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 KDM1AO60341 852 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 SERPINB7O75635 380 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 SORBS2O94875 1100 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 WEE2P0C1S8 567 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 RBP3P10745 1247 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 AOC1P19801 751 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ATXN3P54252 364 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 TAS2R40P59535 323 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 MYBPC1Q00872 1141 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 CLEC16AQ2KHT3 1053 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 OGFRL1Q5TC84 451 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 LLGL2Q6P1M3 1020 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 DNAJC14Q6Y2X3 702 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 RNF111Q6ZNA4 994 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 KCTD1Q719H9 257 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 FASTKD5Q7L8L6 764 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ZNF720Q7Z2F6 126 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 FBXO33Q7Z6M2 555 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 CLEC10AQ8IUN9 316 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 KATNAL2Q8IYT4 538 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 MCOLN2Q8IZK6 566 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ZNF276Q8N554 614 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 DHX38Q92620 1227 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 EME1Q96AY2 570 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 HNRNPABQ99729 332 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 EBF4Q9BQW3 602 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 GPATCH1Q9BRR8 931 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 NRDE2Q9H7Z3 1164 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 COPS7BQ9H9Q2 264 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 TRPC7Q9HCX4 862 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 XPO7Q9UIA9 1087 aaKnown RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 PACSIN3Q9UKS6 424 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ARHGAP26Q9UNA1 814 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 GPC6Q9Y625 555 aaPredicted RBP4.89□□□□□ -1.63
HIPK3-204ENST00000525975 CEPT1Q9Y6K0 416 aa4.89□□□□□ -1.63
HIPK3-204ENST00000525975 ARHGEF37A1IGU5 675 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 C6orf229H3BNL8 230 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 KLF11O14901 512 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 SPTLC1O15269 473 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 TLR3O15455 904 aaKnown RBP4.88□□□□□ -1.63
HIPK3-204ENST00000525975 CFLARO15519 480 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 ZMPSTE24O75844 475 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 CALCAP01258 141 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 SNRPAP09012 282 aaKnown RBP4.88□□□□□ -1.63
HIPK3-204ENST00000525975 DHRS4L1P0CG22 281 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 COL6A2P12110 1019 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 NELFEP18615 380 aaKnown RBP4.88□□□□□ -1.63
HIPK3-204ENST00000525975 ATF3P18847 181 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 RXRGP48443 463 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 BCAP31P51572 246 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 RAB15P59190 212 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 TRPC3Q13507 836 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 ALCAMQ13740 583 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 GK3PQ14409 553 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 INAQ16352 499 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 NFIL3Q16649 462 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 TTC39BQ5VTQ0 682 aaPredicted RBP4.88□□□□□ -1.63
HIPK3-204ENST00000525975 DPP8Q6V1X1 898 aaPredicted RBP4.88□□□□□ -1.63
HIPK3-204ENST00000525975 C16orf86Q6ZW13 317 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 RCOR2Q8IZ40 523 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 FBXW8Q8N3Y1 598 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 XXYLT1Q8NBI6 393 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 LMO3Q8TAP4 145 aa4.88□□□□□ -1.63
HIPK3-204ENST00000525975 ACTRT2Q8TDY3 377 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms