RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TXLNBQ8N3L3 684 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD44-219ENST00000525685 BOLLQ8N9W6 283 aaKnown RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 ACTRT2Q8TDY3 377 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 PPP2R3CQ969Q6 453 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 FAM136AQ96C01 138 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 SNX22Q96L94 193 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 PTDSS2Q9BVG9 487 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 BRIP1Q9BX63 1249 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 ACTRT3Q9BYD9 372 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 DPH1Q9BZG8 443 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 NLRC4Q9NPP4 1024 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 COL20A1Q9P218 1284 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 LRIT1Q9P2V4 623 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 TBC1D30Q9Y2I9 924 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 ARID4BQ4LE39 1312 aaPredicted RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 SPATA31A3Q5VYP0 1347 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 CLTCQ00610 1675 aaKnown RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 DHX29Q7Z478 1369 aaKnown RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD44-219ENST00000525685 PTPRMP28827 1452 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 PRDM15P57071 1507 aaPredicted RBP4.62□□□□□ -1.67
CD44-219ENST00000525685 FAM135AQ9P2D6 1515 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 DEPDC5O75140 1603 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 MROH2AA6NES4 1674 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 C3P01024 1663 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 ZC3H13Q5T200 1668 aaKnown RBP4.62□□□□□ -1.67
CD44-219ENST00000525685 LOC102723971A0A1B0GUV8 181 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 hCG_1984214I3L0E3 225 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 APOL1O14791 398 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 DCLK1O15075 740 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 PEX14O75381 377 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 TSPY4P0CV99 314 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 TSPY10P0CW01 314 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 TPH1P17752 444 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 CD38P28907 300 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 PRKAR1BP31321 381 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 ZNF134P52741 427 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 CACNA2D1P54289 1103 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 ELLP55199 621 aaPredicted RBP4.62□□□□□ -1.67
CD44-219ENST00000525685 ZNF543Q08ER8 600 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 TCF15Q12870 199 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 FAM209BQ5JX69 171 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 KLHDC7AQ5VTJ3 777 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 KIAA0895LQ68EN5 471 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 RGS7BPQ6MZT1 257 aaPredicted RBP4.62□□□□□ -1.67
CD44-219ENST00000525685 TSHZ1Q6ZSZ6 1077 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 MICU3Q86XE3 530 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 SLC15A3Q8IY34 581 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 ATP11CQ8NB49 1132 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 OR56A3Q8NH54 315 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 MAML1Q92585 1016 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 RIPOR3Q96MK2 946 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 CERS4Q9HA82 394 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 STARD7Q9NQZ5 370 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 SERTAD3Q9UJW9 196 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 CCNL1Q9UK58 526 aaPredicted RBP4.62□□□□□ -1.67
CD44-219ENST00000525685 MRPS17Q9Y2R5 130 aaKnown RBP4.62□□□□□ -1.67
CD44-219ENST00000525685 KIF15Q9NS87 1388 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 ERBINQ96RT1 1412 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 KDM5DQ9BY66 1539 aa4.62□□□□□ -1.67
CD44-219ENST00000525685 GCC2Q8IWJ2 1684 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 CEP152O94986 1710 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 F8W8V4 182 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 H7C4K7 107 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 YY2O15391 372 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ORC4O43929 436 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 C1QL1O75973 258 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 MT-ND5P03915 603 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ANXA2P07355 339 aaKnown RBP4.61□□□□□ -1.67
CD44-219ENST00000525685 CHRM2P08172 466 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 SRGNP10124 158 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 PPP3CBP16298 524 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ZNF37AP17032 561 aaPredicted RBP4.61□□□□□ -1.67
CD44-219ENST00000525685 TNFSF4P23510 183 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 FOLR3P41439 243 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 TOB1P50616 345 aaPredicted RBP4.61□□□□□ -1.67
CD44-219ENST00000525685 ITIH3Q06033 890 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 EIF2B5Q13144 721 aaKnown RBP4.61□□□□□ -1.67
CD44-219ENST00000525685 ARHGEF7Q14155 803 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ARL13BQ3SXY8 428 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 RRAGBQ5VZM2 374 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 VWA1Q6PCB0 445 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ZDHHC24Q6UX98 284 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 BEND5Q7L4P6 421 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ZNF280BQ86YH2 543 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 BPIFB1Q8TDL5 484 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ATRIPQ8WXE1 791 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 NELL1Q92832 810 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 LRRC46Q96FV0 321 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 OSBPL9Q96SU4 736 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 CHST8Q9H2A9 424 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ARFGAP3Q9NP61 516 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 SEMA4GQ9NTN9 838 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 TRMT13Q9NUP7 481 aaKnown RBP4.61□□□□□ -1.67
CD44-219ENST00000525685 MID2Q9UJV3 735 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 NDRG4Q9ULP0 352 aaKnown RBP4.61□□□□□ -1.67
CD44-219ENST00000525685 TNFRSF18Q9Y5U5 241 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms