RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PLPPR4Q7Z2D5 763 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 UBE3BQ7Z3V4 1068 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 KSR1Q8IVT5 923 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 FAM217AQ8IXS0 508 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 PEX5LQ8IYB4 626 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MRPL43Q8N983 215 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 MFSD2AQ8NA29 543 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ZBTB8BQ8NAP8 495 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 CNNM3Q8NE01 707 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 ELOA3Q8NG57 546 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 OR6J1Q8NGC5 347 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 OR6B3Q8NGW1 331 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 OR14C36Q8NHC7 312 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SH3RF2Q8TEC5 729 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 TEKT1Q969V4 418 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CYFIP2Q96F07 1278 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 GIMAP5Q96F15 307 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CLPTM1LQ96KA5 538 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 FER1L6-AS2Q96M78 137 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MDFIQ99750 246 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 FDXACB1Q9BRP7 624 aaPredicted RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 NOL10Q9BSC4 688 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 JAM3Q9BX67 310 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 ACPTQ9BZG2 426 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 FOXQ1Q9C009 403 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SMG9Q9H0W8 520 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 CHST8Q9H2A9 424 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SMARCAD1Q9H4L7 1026 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 GREM2Q9H772 168 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 TM9SF3Q9HD45 589 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 DDX4Q9NQI0 724 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 SERINC1Q9NRX5 453 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CHST7Q9NS84 486 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 TBC1D23Q9NUY8 699 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 DDX18Q9NVP1 670 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 CHCHD3Q9NX63 227 aaKnown RBP4.77□□□□□ -1.65
CD44-213ENST00000525209 AATFQ9NY61 560 aaKnown RBP eCLIP4.77□□□□□ -1.65
CD44-213ENST00000525209 STK26Q9P289 416 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 IL19Q9UHD0 177 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 PRSS50Q9UI38 385 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 DAPP1Q9UN19 280 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 PCDHA1Q9Y5I3 950 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CLDN16Q9Y5I7 305 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 CDY2AQ9Y6F7 541 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SESN1Q9Y6P5 492 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 SYNJ1O43426 1573 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 NSD2O96028 1365 aa4.77□□□□□ -1.65
CD44-213ENST00000525209 KDM3AQ9Y4C1 1321 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ARPC4-TTLL3A0A0A6YYG9 625 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 LRRD1A4D1F6 860 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZSCAN5CA6NGD5 496 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 NPIPB15A6NHN6 443 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 M0R082 166 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 DNM1LO00429 736 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZNF263O14978 683 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TMPRSS2O15393 492 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 DNPH1O43598 174 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 NPHS1O60500 1241 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 DDHD2O94830 711 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 PRPF6O94906 941 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 GLP2RO95838 553 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ALBP02768 609 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 PFKMP08237 780 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 MYBL1P10243 752 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 HSPA5P11021 654 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 CPB1P15086 417 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TYMPP19971 482 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 PTAFRP25105 342 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 NFKBIAP25963 317 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 GGT5P36269 586 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 BMPR1AP36894 532 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 IL15P40933 162 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 SKIV2L2P42285 1042 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 MTIF2P46199 727 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 PIP4K2AP48426 406 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 HARS2P49590 506 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 LUMP51884 338 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 POLGP54098 1239 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 GMFBP60983 142 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ATP8B2P98198 1209 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 SPIRE1Q08AE8 756 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TBC1D8BQ0IIM8 1120 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 RALGDSQ12967 914 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 PTP4A2Q12974 167 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 SP140Q13342 867 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CAMK1Q14012 370 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CCDC40Q4G0X9 1142 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 BOLA3Q53S33 107 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 HSP90AA5PQ58FG0 334 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 MBLAC2Q68D91 279 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CWF19L1Q69YN2 538 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 DRICH1Q6PGQ1 229 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 USP17L6PQ6QN14 398 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZNF574Q6ZN55 896 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms