RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SCARA5Q6ZMJ2 495 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 TAS1R2Q8TE23 839 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 SEMA4DQ92854 862 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 IER2Q9BTL4 223 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 FAM126AQ9BYI3 521 aaPredicted RBP13.31□□□□□ -0.28
SMCO4-202ENST00000525141 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
SMCO4-202ENST00000525141 DUS2Q9NX74 493 aaKnown RBP13.31□□□□□ -0.28
SMCO4-202ENST00000525141 TRPM5Q9NZQ8 1165 aa13.31□□□□□ -0.28
SMCO4-202ENST00000525141 SDK1Q7Z5N4 2213 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 FAM92AA1XBS5 289 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 CHURC1-FNTBB4DL54 471 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 LEFTY2O00292 366 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 STX10O60499 249 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 FGFR1OPO95684 399 aaKnown RBP13.3□□□□□ -0.28
SMCO4-202ENST00000525141 GNA14O95837 355 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 OAS1P00973 400 aaKnown RBP13.3□□□□□ -0.28
SMCO4-202ENST00000525141 CKMP06732 381 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 ANXA13P27216 316 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
SMCO4-202ENST00000525141 FNTBP49356 437 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 SRSF5Q13243 272 aaKnown RBP13.3□□□□□ -0.28
SMCO4-202ENST00000525141 LRRC32Q14392 662 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 FAM35AQ86V20 835 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 KIAA2013Q8IYS2 634 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 RUBCNQ92622 972 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 TAF4BQ92750 862 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 WBP2Q969T9 261 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 ARMCX3Q9UH62 379 aaPredicted RBP13.3□□□□□ -0.28
SMCO4-202ENST00000525141 DACH1Q9UI36 760 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 CTNND2Q9UQB3 1225 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 DCHS1Q96JQ0 3298 aa13.3□□□□□ -0.28
SMCO4-202ENST00000525141 HHLA1C9JL84 531 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 ZDHHC11BP0C7U3 371 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 CCDC130P13994 396 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 PFKLP17858 780 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 YWHAQP27348 245 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 HOXA6P31267 233 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 PPP3CCP48454 512 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 STX17P56962 302 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 KLHL40Q2TBA0 621 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 DPCR1Q3MIW9 517 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
SMCO4-202ENST00000525141 UNC93AQ86WB7 457 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 TTC16Q8NEE8 873 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 ZFRQ96KR1 1074 aaKnown RBP13.29□□□□□ -0.28
SMCO4-202ENST00000525141 MED15Q96RN5 788 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 SRRTQ9BXP5 876 aaKnown RBP13.29□□□□□ -0.28
SMCO4-202ENST00000525141 TMEM63CQ9P1W3 806 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 DMXL1Q9Y485 3027 aa13.29□□□□□ -0.28
SMCO4-202ENST00000525141 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
SMCO4-202ENST00000525141 ABL1P00519 1130 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 OPRD1P41143 372 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 SLC6A11P48066 632 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 NRLP54845 237 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
SMCO4-202ENST00000525141 INCA1Q0VD86 236 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 GRSF1Q12849 480 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMCO4-202ENST00000525141 SKOR2Q2VWA4 1001 aaPredicted RBP13.28□□□□□ -0.28
SMCO4-202ENST00000525141 KRT39Q6A163 491 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 TATDN2Q93075 761 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
SMCO4-202ENST00000525141 P2RY13Q9BPV8 354 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 TMEM8AQ9HCN3 771 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 CPQQ9Y646 472 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 CEP250Q9BV73 2442 aa13.28□□□□□ -0.28
SMCO4-202ENST00000525141 K7EQS6 105 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 COCHO43405 550 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 AP1G2O75843 785 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 RTN3O95197 1032 aaPredicted RBP13.27□□□□□ -0.29
SMCO4-202ENST00000525141 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
SMCO4-202ENST00000525141 PXNP49023 591 aaPredicted RBP13.27□□□□□ -0.29
SMCO4-202ENST00000525141 SLC5A3P53794 718 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 MAP3K7CLP57077 242 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.29
SMCO4-202ENST00000525141 LPAL2Q16609 132 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 HEATR6Q6AI08 1181 aaKnown RBP13.27□□□□□ -0.29
SMCO4-202ENST00000525141 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 SFTPA1Q8IWL2 248 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 SLC35C1Q96A29 364 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 CCSER2Q9H7U1 834 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 MMRN2Q9H8L6 949 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 CYP3A43Q9HB55 503 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 PARD6AQ9NPB6 346 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 FAM49BQ9NUQ9 324 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 ANO10Q9NW15 660 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 COMMD8Q9NX08 183 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms